Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9d16
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   3.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   3.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.1  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 419 GKEVSLWQ-TMMERPNFWVEGS 481
           G E++++  T  E PN+W +GS
Sbjct: 242 GHEIAVFSLTHKEDPNYWSQGS 263


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 419 GKEVSLWQ-TMMERPNFWVEGS 481
           G E++++  T  E PN+W +GS
Sbjct: 249 GHEIAVFSLTHKEDPNYWSQGS 270


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +2

Query: 185 RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASN 340
           + R  K K     +  +PR     T   L PQ +A+ A        DRL S+
Sbjct: 137 QNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSH 188


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +2

Query: 185 RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASN 340
           + R  K K     +  +PR     T   L PQ +A+ A        DRL S+
Sbjct: 128 QNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSH 179


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 755 ILC*IRRLINSIGTYSNT 702
           +LC I R + ++ TYS+T
Sbjct: 117 VLCKIIRFLQAVVTYSST 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,843
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)