Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9d16
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 46 4e-05
06_03_0712 + 23803597-23803945,23804118-23805479,23805743-238058... 42 4e-04
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 38 0.009
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 38 0.009
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 37 0.020
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 36 0.027
07_01_0061 - 451093-451377,451501-451596,451714-451824 34 0.14
01_06_1302 + 36129207-36129285,36129376-36129441,36129560-361296... 33 0.25
02_05_1214 + 34976814-34979813 33 0.33
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 32 0.43
04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558... 31 0.76
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 31 1.0
03_05_0519 - 25131614-25134778 31 1.0
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 30 1.7
04_04_1695 + 35433975-35437040 29 3.1
07_01_0578 + 4295386-4296489,4297394-4297507 29 4.0
11_05_0034 + 18507023-18507243,18507347-18507473,18508463-185085... 29 5.3
05_04_0397 - 20937280-20937386,20937494-20939681 28 7.1
01_05_0513 - 22864657-22867899 28 7.1
11_01_0114 - 886404-887111 28 9.3
01_06_0198 + 27444925-27445860 28 9.3
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 28 9.3
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +2
Query: 152 GRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRL 331
G + Y + GR + KT VA+RTLSP W+ F +R + +D L + + D DR
Sbjct: 20 GGLSDPYAKLQLGR-QRGKTRVAKRTLSPTWDEEFAFRVVDLKD----ELVVVVVDEDRY 74
Query: 332 ASNDFMGAVRLSL 370
S+DF+G VR+ L
Sbjct: 75 FSDDFLGQVRVPL 87
>06_03_0712 +
23803597-23803945,23804118-23805479,23805743-23805811,
23806050-23806330,23806817-23807076,23807521-23807689,
23807796-23808068,23808251-23808499
Length = 1003
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
+ KT+VARRTL+P W+ F++ D+ A L +S+ + D+ SND +G VR+ L
Sbjct: 34 RAKTAVARRTLAPAWDEEFSF---LVGDI-AEELVVSVLNEDKYFSNDLLGKVRVPL 86
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 191 RLAKQ--KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRL 364
+L KQ KT V ++ L+P W+ F++ +D+ L+L ++D D + +DF+G V++
Sbjct: 29 QLGKQRFKTKVVKKNLNPAWDQEFSFSVGDVRDV----LKLYVYDEDMIGIDDFLGQVKV 84
Query: 365 SL 370
L
Sbjct: 85 PL 86
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 131 SKKEIKDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELS 310
+KK+ Y L +L +KTSV R L+P W F L +D ++ALEL+
Sbjct: 360 TKKDFLGKSDPYVKLKLTEEKLPSKKTSVKRSNLNPEWNEDFK---LVVKDPESQALELT 416
Query: 311 LWDRDRLASNDFMG 352
++D +++ +D +G
Sbjct: 417 VYDWEQVGKHDKIG 430
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
K+KTSV L+P W TF+ L +D + L L ++D D+L + +G +L L
Sbjct: 359 KEKTSVIDDNLNPEWNETFS---LIAEDKETQHLILQVFDEDKLKQDKRLGIAKLPL 412
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 134 KKEIKDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSL 313
KK++ Y L +L +KT+V R L+P W F + P+ +ALE+++
Sbjct: 274 KKDLLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTDPE---TQALEINV 330
Query: 314 WDRDRLASNDFMG 352
+D +++ ++ MG
Sbjct: 331 FDWEQVGKHEKMG 343
>07_01_0061 - 451093-451377,451501-451596,451714-451824
Length = 163
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +2
Query: 146 KDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRD 325
+D R + Y++ G+ K KTSV +++++P W T + P ++L ++D+D
Sbjct: 21 RDTRGSDPYVVLRLGK-QKVKTSVKKKSVNPIWHEELTLSIMNP----IAPIKLGVFDKD 75
Query: 326 RLASNDFMGAVRLSL 370
+ +D MG + L
Sbjct: 76 TFSRDDPMGDAEIDL 90
>01_06_1302 +
36129207-36129285,36129376-36129441,36129560-36129698,
36129996-36130137,36130262-36130282,36130483-36130512
Length = 158
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 191 RLAKQKTSVAR-RTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLS 367
R ++K+SVAR + +P W F ++ L L L D D + +DF+G ++
Sbjct: 38 RSQERKSSVARDQGKNPSWNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATIN 97
Query: 368 LGTGTYMG-AHVNWMDSAGK 424
+ +G H W S K
Sbjct: 98 VTDLISLGMEHGTWEMSESK 117
>02_05_1214 + 34976814-34979813
Length = 999
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 146 KDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRD 325
KDG+ + S + +++T + L+P W + P DL RA+++ +++ D
Sbjct: 21 KDGQGSSSAYVEVEFEHQRRRTRARPKELNPVWNERLVFAVADPDDLPYRAIDVGVYN-D 79
Query: 326 RLASNDFMG 352
R AS G
Sbjct: 80 RAASGGVAG 88
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
Y+ + GR + KT+V +R LSP W+ F G D A L +S+ + + F+
Sbjct: 45 YVRLQMGR-RRAKTTVVKRCLSPLWDEEF---GFAVGD-AEEELVVSVLNEEGYFGGGFL 99
Query: 350 GAVRLSLGT 376
G V++ L T
Sbjct: 100 GRVKVPLST 108
>04_04_1636 +
34951841-34954322,34954440-34954627,34955737-34955838,
34956101-34956177,34956258-34956319,34956504-34956511
Length = 972
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRL--ASNDFMGAVRLS 367
+T++ + L+P W F + P +L ALE +++ +R S F+G VR++
Sbjct: 39 RTAIKDKDLNPVWNERFYFNVSDPSNLPELALEAYVYNINRSIDGSRSFLGKVRIA 94
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 191 RLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
+L +KTS+ L+P W F + P+ + LEL ++D +++ +D +G
Sbjct: 293 KLPSKKTSIKMSNLNPEWNEHFRFIVKDPE---TQILELRMFDWEKVKMHDKLG 343
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSLGTG 379
+++T+ R L+P+W + P + A LEL+L++ + + G R G
Sbjct: 41 RRRTATRPRDLNPQWGERLEFLVHDPDAMCAETLELNLYNDKKAIAATGGGGRRGGTFLG 100
Query: 380 TYMGAHVNWMDSAGKEVSLWQTMMERPNF-WVEGSLPLR 493
A ++ AG EV ++ + +R F ++G + L+
Sbjct: 101 KVKVAGASF-SKAGDEVLVYYPLEKRSVFSQIKGEIGLK 138
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 134 KKEIKDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSL 313
KK++ Y L +L +KT+V R L+P W F + P+ + LE+ +
Sbjct: 258 KKDLLGKSDPYVKLTMSDDKLPSKKTTVKRGNLNPEWNEDFKFVVTDPE---TQELEIKV 314
Query: 314 WDRDRLASNDFM 349
+D ++ A N F+
Sbjct: 315 FDWEQ-AWNSFV 325
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALEL------SLWDRDRLASNDFMGAVR 361
KQ+T SP+W HT + P L + +++ SL D + F+G VR
Sbjct: 34 KQRTPTKPADRSPQWNHTLVFDVRDPSRLPSLPVDVSVHHDRSLTDHHATRLHTFLGRVR 93
Query: 362 LS 367
+S
Sbjct: 94 IS 95
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 362 LSLGTGTYMGAHVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQLIN 508
L L G ++G V W +SA K++ E P+ +G + RP++ N
Sbjct: 243 LDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSLKKKGFILPRPKMAN 291
>11_05_0034 +
18507023-18507243,18507347-18507473,18508463-18508531,
18508620-18508763
Length = 186
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 350 GAVRLSLGTGTYMGAHVNWMDSAGKEVSLWQTMMERPNFW 469
G + L L GT++ H++ MD A L +E P+ W
Sbjct: 83 GFLELDLVLGTWVEQHIHSMDEANIRALLQVLDLENPDLW 122
>05_04_0397 - 20937280-20937386,20937494-20939681
Length = 764
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 146 KDGRFNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRD 325
KDGR +Y + + G +T TL+P+W +T+ P + + ++D +
Sbjct: 415 KDGRTTDAYCVAKYGP-KWVRTRTILNTLNPQWNEQYTWEVFDP----CTVITVVVFDNN 469
Query: 326 RLASN-----DFMGAVRLSLGT 376
++ N + +G VR+ L T
Sbjct: 470 QIGKNGDARDESIGKVRIRLST 491
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLW 316
+++T R LSP+W + P + A AL++SL+
Sbjct: 58 RKRTRTVPRDLSPQWHERLEFAVHDPAAMHAEALDVSLY 96
>11_01_0114 - 886404-887111
Length = 235
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 492 LKGKDPSTQKFGRSIIVCQSETSFPALSIQL 400
L+ +DP+T+ +I SFPA+S+QL
Sbjct: 75 LRVRDPTTRLVSTRLIGLSPRLSFPAMSVQL 105
>01_06_0198 + 27444925-27445860
Length = 311
Score = 27.9 bits (59), Expect = 9.3
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +2
Query: 281 DLAAR--ALELSLWDRDRL--ASNDFMGAVRLS--LGTGTYMGAHVNWMDSAGKEVSLW- 439
DLA R A EL++ D R +S A+RL+ +G G A V+ +D AG++V LW
Sbjct: 124 DLATRLAATELTIADMQRALDSSAGEAEALRLASEIGPGMLWDA-VSRLDRAGRQVGLWK 182
Query: 440 -QTMMERPN 463
QTM N
Sbjct: 183 GQTMKYSTN 191
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 200 KQKTSVARRTLSPRWEHTFTY 262
K++T V +TLSP W TF +
Sbjct: 606 KKRTKVVYKTLSPDWNQTFEF 626
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,048,316
Number of Sequences: 37544
Number of extensions: 350070
Number of successful extensions: 835
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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