Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9d16
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.83 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   3.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   3.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +2

Query: 278  QDLAARALELSLWDRDRLASNDFMGAVRLSLGTGTYMGAHVNWMDSAG--KEVS--LWQT 445
            +D   + LE ++WDR +      +GA++L+    +Y G     ++  G  KE S  L   
Sbjct: 1291 RDADVKDLERTIWDRSKQLKIIDLGALKLADEVASYYGFEAYELNRYGVDKEWSFNLADV 1350

Query: 446  MMERPNFWVE 475
              ER N +++
Sbjct: 1351 QFERDNHYLK 1360


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 395 HVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 502
           HVN +   G     W T     +F  +G+L +RP L
Sbjct: 78  HVNTLAGGGNWEFQWYTNNRSNSFVEDGALNIRPTL 113


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 395 HVNWMDSAGKEVSLWQTMMERPNFWVEGSLPLRPQL 502
           HVN +   G     W T     +F  +G+L +RP L
Sbjct: 78  HVNTLAGGGNWEFQWYTNNRSNSFVEDGALNIRPTL 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,958
Number of Sequences: 2352
Number of extensions: 12905
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)