Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9d16
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 63 2e-10
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 63 2e-10
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 63 2e-10
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 61 1e-09
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 61 1e-09
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 61 1e-09
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 61 1e-09
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 61 1e-09
U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin p... 53 2e-07
AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin... 53 2e-07
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 50 2e-06
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 50 2e-06
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 50 2e-06
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 50 2e-06
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 50 2e-06
U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin ... 49 4e-06
U55856-5|AAA98023.1| 441|Caenorhabditis elegans Synaptotagmin p... 47 1e-05
L15302-1|AAA28145.1| 441|Caenorhabditis elegans synaptotagmin I... 47 1e-05
AJ303369-1|CAC33880.1| 153|Caenorhabditis elegans synaptotagmin... 47 2e-05
AC024869-3|AAK68605.2| 452|Caenorhabditis elegans Synaptotagmin... 44 2e-04
AF098985-4|AAC67422.2| 373|Caenorhabditis elegans Synaptotagmin... 43 3e-04
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 38 0.008
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 38 0.010
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z82078-4|CAB04945.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 30 1.6
AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical ... 30 2.1
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 29 2.7
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025451-14|AAB71199.1| 577|Caenorhabditis elegans Hypothetical... 28 6.3
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP+R ++++++V TL P W+ F Y GL L R LEL++WD D+ +N F+
Sbjct: 883 FLLPDRSEKSRRQSAVIAETLMPVWDEVFYYNGLTEPMLLQRVLELTVWDYDKFGTNSFL 942
Query: 350 GAVRLSLGTGTYMGAH 397
G + L + G H
Sbjct: 943 GETLIDLASVPLDGEH 958
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP+R ++++++V TL P W+ F Y GL L R LEL++WD D+ +N F+
Sbjct: 883 FLLPDRSEKSRRQSAVIAETLMPVWDEVFYYNGLTEPMLLQRVLELTVWDYDKFGTNSFL 942
Query: 350 GAVRLSLGTGTYMGAH 397
G + L + G H
Sbjct: 943 GETLIDLASVPLDGEH 958
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP+R ++++++V TL P W+ F Y GL L R LEL++WD D+ +N F+
Sbjct: 883 FLLPDRSEKSRRQSAVIAETLMPVWDEVFYYNGLTEPMLLQRVLELTVWDYDKFGTNSFL 942
Query: 350 GAVRLSLGTGTYMGAH 397
G + L + G H
Sbjct: 943 GETLIDLASVPLDGEH 958
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 LLPE-RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
L+PE G +KQKT R TL+P+W TFTY+ L P D R L + +WD DR + NDFM
Sbjct: 202 LIPEDSGCKSKQKTKTLRATLNPQWNETFTYK-LLPGD-KDRRLSIEVWDWDRTSRNDFM 259
Query: 350 GAVRLSLGTGTYM 388
G+ LS G M
Sbjct: 260 GS--LSFGISELM 270
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 LLPE-RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
L+PE G +KQKT R TL+P+W TFTY+ L P D R L + +WD DR + NDFM
Sbjct: 202 LIPEDSGCKSKQKTKTLRATLNPQWNETFTYK-LLPGD-KDRRLSIEVWDWDRTSRNDFM 259
Query: 350 GAVRLSLGTGTYM 388
G+ LS G M
Sbjct: 260 GS--LSFGISELM 270
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 LLPE-RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
L+PE G +KQKT R TL+P+W TFTY+ L P D R L + +WD DR + NDFM
Sbjct: 342 LIPEDSGCKSKQKTKTLRATLNPQWNETFTYK-LLPGD-KDRRLSIEVWDWDRTSRNDFM 399
Query: 350 GAVRLSLGTGTYM 388
G+ LS G M
Sbjct: 400 GS--LSFGISELM 410
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 LLPE-RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
L+PE G +KQKT R TL+P+W TFTY+ L P D R L + +WD DR + NDFM
Sbjct: 202 LIPEDSGCKSKQKTKTLRATLNPQWNETFTYK-LLPGD-KDRRLSIEVWDWDRTSRNDFM 259
Query: 350 GAVRLSLGTGTYM 388
G+ LS G M
Sbjct: 260 GS--LSFGISELM 270
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 LLPE-RGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
L+PE G +KQKT R TL+P+W TFTY+ L P D R L + +WD DR + NDFM
Sbjct: 202 LIPEDSGCKSKQKTKTLRATLNPQWNETFTYK-LLPGD-KDRRLSIEVWDWDRTSRNDFM 259
Query: 350 GAVRLSLGTGTYM 388
G+ LS G M
Sbjct: 260 GS--LSFGISELM 270
>U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin
protein 1, isoform b protein.
Length = 443
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +2
Query: 182 ERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVR 361
+R RL K+KT++ R+TL+P + +F + L + +L +++ D D+L SND +G
Sbjct: 340 DRKRLKKKKTNIKRKTLNPYFNESFVFDKLPLHKMKKVSLMITVMDYDKLGSNDAIGRCL 399
Query: 362 LSL-GTGTYMGAHVNWMDSAGKEVSLWQTM 448
L GTG + ++ + S + ++ W T+
Sbjct: 400 LGCNGTGAELRHWMDMLASPRRPIAQWHTL 429
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YLLPE+ + K +T V R+TL+P + TF ++ + ++ A+ L +++D DR + +D +
Sbjct: 202 YLLPEKKK--KVETKVHRKTLNPVFNETFIFK-VAFNEITAKTLVFAIYDFDRFSKHDQI 258
Query: 350 GAVRLSLGTGTYMGAHVNWMDSA 418
G V + LG W D A
Sbjct: 259 GQVLIPLGKIDLGAVIEEWKDIA 281
>AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin 1
protein.
Length = 155
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +2
Query: 182 ERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVR 361
+R RL K+KT++ R+TL+P + +F + L + +L +++ D D+L SND +G
Sbjct: 59 DRKRLKKKKTNIKRKTLNPYFNESFVFDKLPLHKMKKVSLMITVMDYDKLGSNDAIGRCL 118
Query: 362 LSL-GTGTYMGAHVNWMDSAGKEVSLWQTM 448
L GTG + ++ + S + ++ W T+
Sbjct: 119 LGCNGTGAELRHWMDMLASPRRPIAQWHTL 148
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP + K + +TL+P W +Y G+ D + L +++ DRDR+ S DF+
Sbjct: 717 HLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGITEDDKEKKILRVTVLDRDRIGS-DFL 775
Query: 350 GAVRLSL 370
G R++L
Sbjct: 776 GETRIAL 782
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
L P + + KTS +RTL+P W + + +DL + L++ ++D D +D++G
Sbjct: 858 LTPITSKAHRAKTSTKKRTLNPEWNEQLQF-VVPFKDLPKKTLQIGVYDHDLGKHDDYIG 916
Query: 353 AVRLSLGTGTYMGAH-VNWMDSAGKEVSLWQTM 448
+ LS G + +++ G V W +
Sbjct: 917 GILLSTSAKDERGRQWIKCIENPGTLVEAWHRL 949
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP + K + +TL+P W +Y G+ D + L +++ DRDR+ S DF+
Sbjct: 792 HLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGITEDDKEKKILRVTVLDRDRIGS-DFL 850
Query: 350 GAVRLSL 370
G R++L
Sbjct: 851 GETRIAL 857
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
L P + + KTS +RTL+P W + + +DL + L++ ++D D +D++G
Sbjct: 933 LTPITSKAHRAKTSTKKRTLNPEWNEQLQF-VVPFKDLPKKTLQIGVYDHDLGKHDDYIG 991
Query: 353 AVRLSLGTGTYMGAH-VNWMDSAGKEVSLWQTM 448
+ LS G + +++ G V W +
Sbjct: 992 GILLSTSAKDERGRQWIKCIENPGTLVEAWHRL 1024
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP + K + +TL+P W +Y G+ D + L +++ DRDR+ S DF+
Sbjct: 726 HLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGITEDDKEKKILRVTVLDRDRIGS-DFL 784
Query: 350 GAVRLSL 370
G R++L
Sbjct: 785 GETRIAL 791
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
L P + + KTS +RTL+P W + + +DL + L++ ++D D +D++G
Sbjct: 867 LTPITSKAHRAKTSTKKRTLNPEWNEQLQF-VVPFKDLPKKTLQIGVYDHDLGKHDDYIG 925
Query: 353 AVRLSLGTGTYMGAH-VNWMDSAGKEVSLWQTM 448
+ LS G + +++ G V W +
Sbjct: 926 GILLSTSAKDERGRQWIKCIENPGTLVEAWHRL 958
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein 1,
isoform d protein.
Length = 1106
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP + K + +TL+P W +Y G+ D + L +++ DRDR+ S DF+
Sbjct: 870 HLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGITEDDKEKKILRVTVLDRDRIGS-DFL 928
Query: 350 GAVRLSL 370
G R++L
Sbjct: 929 GETRIAL 935
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
L P + + KTS +RTL+P W + + +DL + L++ ++D D +D++G
Sbjct: 1011 LTPITSKAHRAKTSTKKRTLNPEWNEQLQF-VVPFKDLPKKTLQIGVYDHDLGKHDDYIG 1069
Query: 353 AVRLSLGTGTYMGAH-VNWMDSAGKEVSLWQTM 448
+ LS G + +++ G V W +
Sbjct: 1070 GILLSTSAKDERGRQWIKCIENPGTLVEAWHRL 1102
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP + K + +TL+P W +Y G+ D + L +++ DRDR+ S DF+
Sbjct: 717 HLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGITEDDKEKKILRVTVLDRDRIGS-DFL 775
Query: 350 GAVRLSL 370
G R++L
Sbjct: 776 GETRIAL 782
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMG 352
L P + + KTS +RTL+P W + + +DL + L++ ++D D +D++G
Sbjct: 858 LTPITSKAHRAKTSTKKRTLNPEWNEQLQF-VVPFKDLPKKTLQIGVYDHDLGKHDDYIG 916
Query: 353 AVRLSLGTGTYMGAH-VNWMDSAGKEVSLWQTM 448
+ LS G + +++ G V W +
Sbjct: 917 GILLSTSAKDERGRQWIKCIENPGTLVEAWHRL 949
>U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin
protein 2 protein.
Length = 270
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YL R L+K+KTS +TL+P + +F ++ ++P + L +S+WD D+++ NDF+
Sbjct: 160 YLHHGRKLLSKKKTSRKYKTLNPYYNESFQFK-IEPHMIEKVHLIVSVWDYDKMSKNDFI 218
Query: 350 GAV-----RLSLGTGTYMGAHVNW--MDSAGKEVSLWQTMMER 457
G V L+L T+ W M ++ + V W T+ ER
Sbjct: 219 GEVTLGSKHLNLPQITH-ACSEQWAEMMTSRRPVVQWHTLQER 260
>U55856-5|AAA98023.1| 441|Caenorhabditis elegans Synaptotagmin
protein 1, isoform a protein.
Length = 441
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YLLPE+ + K +T V R+TL+P + TF ++ + ++ A+ L +++D DR + +D +
Sbjct: 202 YLLPEKKK--KVETKVHRKTLNPVFNETFIFK-VAFNEITAKTLVFAIYDFDRFSKHDQI 258
Query: 350 GAVRLSLGTGTYMGAHVNWMDSA 418
G V + LG W D A
Sbjct: 259 GQVLIPLGKIDLGAVIEEWKDIA 281
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 191 RLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
RL K+KTS+ + TL+P + +F++ + + + +L +++ D D+L SND +G L
Sbjct: 342 RLKKKKTSIKKCTLNPYYNESFSFE-VPFEQIQKVSLMITVMDYDKLGSNDAIGRCLLGC 400
Query: 371 -GTGTYMGAHVNWMDSAGKEVSLWQTM 448
GTG + ++ + S + ++ W T+
Sbjct: 401 NGTGAELRHWMDMLASPRRPIAQWHTL 427
>L15302-1|AAA28145.1| 441|Caenorhabditis elegans synaptotagmin I
protein.
Length = 441
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YLLPE+ + K +T V R+TL+P + TF ++ + ++ A+ L +++D DR + +D +
Sbjct: 202 YLLPEKKK--KVETKVHRKTLNPVFNETFIFK-VAFNEITAKTLVFAIYDFDRFSKHDQI 258
Query: 350 GAVRLSLGTGTYMGAHVNWMDSA 418
G V + LG W D A
Sbjct: 259 GQVLIPLGKIDLGAVIEEWKDIA 281
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 191 RLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
RL K+KTS+ + TL+P + +F++ + + + +L +++ D D+L SND +G L
Sbjct: 342 RLKKKKTSIKKCTLNPYYNESFSFE-VPFEQIQKVSLMITVMDYDKLGSNDAIGRCLLGC 400
Query: 371 -GTGTYMGAHVNWMDSAGKEVSLWQTM 448
GTG + ++ + S + ++ W T+
Sbjct: 401 NGTGAELRHWMDMLASPRRPIAQWHTL 427
>AJ303369-1|CAC33880.1| 153|Caenorhabditis elegans synaptotagmin 1
protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 191 RLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
RL K+KTS+ + TL+P + +F++ + + + +L +++ D D+L SND +G L
Sbjct: 61 RLKKKKTSIKKCTLNPYYNESFSFE-VPFEQIQKVSLMITVMDYDKLGSNDAIGRCLLGC 119
Query: 371 -GTGTYMGAHVNWMDSAGKEVSLWQTM 448
GTG + ++ + S + ++ W T+
Sbjct: 120 NGTGAELRHWMDMLASPRRPIAQWHTL 146
>AC024869-3|AAK68605.2| 452|Caenorhabditis elegans Synaptotagmin
protein 3 protein.
Length = 452
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YL+ RL K+KT++ +TL+P + +F++ + + + L +++ D DR+ SN+ +
Sbjct: 186 YLMMGTKRLEKKKTTIKMKTLNPYYNESFSF-DVTSEKMQRVHLHVTVSDYDRVGSNERI 244
Query: 350 GAVRL-SLGTGTYMGAHVNWMDSAGKEVSLWQTMMERPNFWV 472
G V + + TG + + + + + V+ W T+ N V
Sbjct: 245 GQVIIGTCATGVALKQWNDMLATPRRSVAQWHTLHAMENLIV 286
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/68 (29%), Positives = 43/68 (63%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
+LLP++ + K +T V R++L+P + +FT++ + ++ + L L+++D DR +D +
Sbjct: 58 FLLPDKKK--KLQTKVQRKSLNPVFNESFTFK-IPFNEIGGQTLVLNVFDFDRFGKHDQI 114
Query: 350 GAVRLSLG 373
G + + LG
Sbjct: 115 GQISIPLG 122
>AF098985-4|AAC67422.2| 373|Caenorhabditis elegans Synaptotagmin
protein 6 protein.
Length = 373
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 167 SYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDF 346
++LL + G+ +++ V RR L+P + T ++RG + L L L + D DR +S+D
Sbjct: 143 AFLLQDPGQ--SERSKVHRRNLNPTFNETLSFRGHSMKKLHDMTLVLQVMDYDRFSSDDP 200
Query: 347 MGAVRLSLGTGTYMGAHVNW 406
+G + L L + + V W
Sbjct: 201 IGEILLPLKHVKFESSPVYW 220
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSLGTGTY 385
KT V ++L+P ++ TF + + P + L ++ D D L SNDF G L L
Sbjct: 1018 KTKVVSKSLNPIFDETFEFH-IPPNPPSTAMLHFTVMDHDYLRSNDFAGEAFLELNDVPG 1076
Query: 386 MGA 394
GA
Sbjct: 1077 FGA 1079
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 209 TSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSLGTGTYM 388
+SV ++TL+P+W F + +D+ + +WD D + L+ TG +
Sbjct: 196 SSVQKKTLNPKWSEKFQF---TVEDVQRDQFHIDIWDHDDEEQSVLDAVSSLNQITGGFK 252
Query: 389 G 391
G
Sbjct: 253 G 253
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 167 SYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWD 319
+Y+ P+ +KQKT V R T P + Y + L+ R LE+S+W+
Sbjct: 1514 TYVRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTEFPIEILSTRVLEVSIWN 1564
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 167 SYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWD 319
+Y+ P+ +KQKT V R T P + Y + L+ R LE+S+W+
Sbjct: 1514 TYVRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTEFPIEILSTRVLEVSIWN 1564
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical protein
F45E4.3a protein.
Length = 1231
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +2
Query: 170 YLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFM 349
YLLP R K++T + +P W Y+ + P L LE ++ D R + +
Sbjct: 1066 YLLPGRKVSHKRRTRFVDSSCAPEWNQVLEYQ-VAPHTLNTMFLEFTVCDYQRDVDDLPL 1124
Query: 350 GAVRLSLGTGTYMGAHVNWMDSAG 421
G V++ L + + W G
Sbjct: 1125 GNVQIPLADKSAINTGPRWYPLQG 1148
>Z82078-4|CAB04945.1| 362|Caenorhabditis elegans Hypothetical
protein W09D6.3 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 323 DRLASNDFMGAVRLSLGTGTYMGAHVNWMDSAGKEVSLWQTMM 451
D L S +++ L+L Y+GAH + DS G + W +M+
Sbjct: 157 DSLISLEYLEPRNLTLSDVDYVGAHFHHTDSYGNQFINWNSMI 199
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 706 ILYLKNLGRVEVSKSIYKFCRSKEECQNLSHFLFTEYLELA 584
I ++ + +++ K+I FCR+K++C ++ HFL L A
Sbjct: 494 IYVVRAIHALQMDKAIV-FCRTKQQCDHMEHFLQQNNLSAA 533
>AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical
protein F54G2.1b protein.
Length = 972
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 209 TSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSLGTGTYM 388
+SV ++TL+P+W F + +D+ + +WD D + L+ TG +
Sbjct: 212 SSVQKKTLNPKWSEKFQF---TVEDVQRDQFHIDIWDHDDEEQSVLDAVSSLNQITGGFK 268
Query: 389 G 391
G
Sbjct: 269 G 269
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
K+ + L+P W+ F + D+ + L ++D DR ++DFMGA + +
Sbjct: 93 KSGTIFKNLNPSWDEEFQ---MIVDDVTC-PIRLEVFDFDRFCTDDFMGAAEVDM 143
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
+T+ +TLSP W +T+ +D+ L+++++D D +F+G V++ L
Sbjct: 480 QTNTIYKTLSPSWNKIYTF---AVKDIHT-CLQVTIYDEDPNNRFEFLGRVQIPL 530
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
K+ + L+P W+ F + D+ + L ++D DR ++DFMGA + +
Sbjct: 179 KSGTIFKNLNPSWDEEFQ---MIVDDVTC-PIRLEVFDFDRFCTDDFMGAAEVDM 229
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 206 KTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSL 370
+T+ +TLSP W +T+ +D+ L+++++D D +F+G V++ L
Sbjct: 566 QTNTIYKTLSPSWNKIYTF---AVKDIHT-CLQVTIYDEDPNNRFEFLGRVQIPL 616
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 221 RRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRLASNDFMGAVRLSLGTG 379
++T +P W FT+R + A +++ ++D +RL + MG V +L G
Sbjct: 65 KKTRNPTWNSVFTFRVTR-----ACQMKILVYDENRLRKDVLMGFVSRTLNDG 112
>AF025451-14|AAB71199.1| 577|Caenorhabditis elegans Hypothetical
protein C24H12.1 protein.
Length = 577
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = +2
Query: 158 FNYSYLLPERGRLAKQKTSVARRTLSPRWEHTFTYRGLKPQDLAARALELSLWDRDRL 331
F+ Y R +QKT V + W HT G K + A+ +W D L
Sbjct: 453 FDLKYGFLTRCLQRRQKTVVKYSPIGVEWRHTVDIGGFKDDEQRKNAIFQFIWTDDLL 510
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 354 RCDSRSAQEHTWVPTSTGWIVRGKKFHSGRQ 446
R + QE VP + W +RGK F+SG Q
Sbjct: 476 RSPNLKRQECVTVPNNGTWDMRGKNFYSGIQ 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,274
Number of Sequences: 27780
Number of extensions: 313698
Number of successful extensions: 770
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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