Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9d13
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   0.57 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.57 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.57 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.57 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   0.75 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   9.3  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 119 NVYIINIQRCGKKILSEHLSFTERLYYKYST 27
           +V+ ++  +C  +I+ EHL      YY+  T
Sbjct: 8   SVFRLDQDQCSHRIVREHLGLKHDNYYELET 38


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 119 NVYIINIQRCGKKILSEHLSFTERLYYKYST 27
           +V+ ++  +C  +I+ EHL      YY+  T
Sbjct: 322 SVFRLDQDQCSHRIVREHLGLKHDNYYELET 352


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 119 NVYIINIQRCGKKILSEHLSFTERLYYKYST 27
           +V+ ++  +C  +I+ EHL      YY+  T
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLKHDNYYELET 585


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 119 NVYIINIQRCGKKILSEHLSFTERLYYKYST 27
           +V+ ++  +C  +I+ EHL      YY+  T
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLKHDNYYELET 585


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 237 FWTLWSGLQTERL 275
           +WT W+G  TE+L
Sbjct: 115 YWTCWNGTATEQL 127


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 131 ARVIFGTIIALPEITHTITHVTERDRSARVYKNMS 235
           A+ I G   +LP + H         R  +VY+ +S
Sbjct: 471 AKCIIGKDYSLPMVNHAAASRVNIQRMKQVYQQLS 505


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 445 FFFNYILLFIH*FYSRQILTR 383
           + FNY ++ +  FY R+  TR
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTR 96


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 125 NVNVYIINIQRCGKKILSEHLSFTERLYYKYSTLLVLS 12
           + +VY + IQR   +I +  ++FT + ++  +  L+LS
Sbjct: 358 SADVYNLEIQRFIHQIGTLEVAFTGKNFFSITRGLILS 395


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 125 NVNVYIINIQRCGKKILSEHLSFTERLYYKYSTLLVLS 12
           + +VY + IQR   +I +  ++FT + ++  +  L+LS
Sbjct: 358 SADVYNLEIQRFIHQIGTLEVAFTGKNFFSITRGLILS 395


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 176 HTITHVTERDRSARVYKNMSVLDAVEWIANRAFECKDKFIIN 301
           HT+ H T   RS    KN   L  +   A+  F C     IN
Sbjct: 2   HTLQHFTIDTRSTHSMKNFKYLKVLVTFAH--FICLFPITIN 41


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -2

Query: 430 ILLFIH*FYSRQILTR*NVFVNNFVIIYFQKFQMLQSV 317
           IL+F+  +Y R I+   N  +N   ++   +F+M+ ++
Sbjct: 85  ILIFLVNWYPRLIIGIMNSTLNLIFLLIQTRFEMINNI 122


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -2

Query: 229 IFIYTSGAVTFCNMSDCVCYLWQRDNGPENYTRV 128
           I++Y +        SD   + WQ +   E  TR+
Sbjct: 11  IWLYLTAIYVSSRKSDSGIWYWQCNTDEETCTRI 44


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 434 LYSFIYTLILFTTNI 390
           +Y F Y  ILFT ++
Sbjct: 238 IYYFYYAFILFTVHL 252


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 229 IFIYTSGAVTFCNMSDCVCY 170
           + +Y SGA+        VCY
Sbjct: 10  LLVYFSGALVSATTDKVVCY 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,107
Number of Sequences: 336
Number of extensions: 1996
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)