Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9d08
(354 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O96233 Cluster: Putative uncharacterized protein PFB070... 38 0.049
UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5; Plasmo... 35 0.46
UniRef50_A7SJ37 Cluster: Predicted protein; n=1; Nematostella ve... 34 0.61
UniRef50_Q9GVA8 Cluster: Erythrocyte membrane-associated antigen... 34 0.80
UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2; ... 33 1.1
UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_0006... 32 3.2
UniRef50_Q9Y3Q7 Cluster: ADAM 18 precursor; n=12; Eutheria|Rep: ... 32 3.2
UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella ve... 31 5.7
UniRef50_Q8IKC0 Cluster: Putative uncharacterized protein; n=1; ... 30 9.9
>UniRef50_O96233 Cluster: Putative uncharacterized protein PFB0700c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFB0700c - Plasmodium falciparum (isolate 3D7)
Length = 972
Score = 37.9 bits (84), Expect = 0.049
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 RNDVICFSKLNSLYE*NSTCKTQSRDDVICFSK----LNLRNDVICLNSLYE*NSTCKTQ 170
++D+IC +K +++ ++DD IC +K N ++D+IC N N
Sbjct: 122 KDDIICNNKDDTMCNNKDDTICNNKDDTICNNKDDIICNNKDDIICNN-----NDDTICN 176
Query: 171 SRDDVICFSKLNLGNDVICFSELNSLYE*NSTCKTQSRDDVI 296
++DD IC N +D IC + +++ N + DD I
Sbjct: 177 NKDDTIC----NNNDDTICNNNDDTICNNNDDTICNNNDDTI 214
>UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5;
Plasmodium|Rep: DNA mismatch repair enzyme - Plasmodium
falciparum
Length = 1016
Score = 34.7 bits (76), Expect = 0.46
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 51 NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLGNDVICF 230
N TC D+ I + L N++ C N ++ N TC D+ I + L N++ C
Sbjct: 287 NMTCNNLPHDNNITCNNLPHDNNITCNNIPHDNNITCNNLPHDNNITCNNLQHDNNITC- 345
Query: 231 SELNSLYE*NSTCKTQSRDD 290
N ++ N TC D+
Sbjct: 346 --NNLPHDNNITCNNLPCDN 363
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 33 NSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLG 212
N ++ N TC D+ I + + N++ C N ++ N TC D+ I + L
Sbjct: 292 NLPHDNNITCNNLPHDNNITCNNIPHDNNITCNNLPHDNNITCNNLQHDNNITCNNLPHD 351
Query: 213 NDVIC 227
N++ C
Sbjct: 352 NNITC 356
>UniRef50_A7SJ37 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 796
Score = 34.3 bits (75), Expect = 0.61
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDV--IC-LNSLYE*NSTCKTQSR 176
+DV +++ L + +STC+ DDV +++ +DV C ++ + + S C+
Sbjct: 497 DDVRSACRVHPLDDVHSTCRVHPLDDVHSTCRVHPIDDVRSTCRVHPIDDVRSACRVHPL 556
Query: 177 DDVICFSKLNLGNDVICFSELNSLYE*NSTCKTQSRDD 290
DDV +++ +DV ++ L + +STC+ DD
Sbjct: 557 DDVHSTCRVHPLDDVRSACRVHPLDDVHSTCRVHPIDD 594
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 54 STCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLGNDVICFS 233
S C+ DDV +++ +DV +STC+ DDV +++ +DV
Sbjct: 501 SACRVHPLDDVHSTCRVHPLDDV---------HSTCRVHPIDDVRSTCRVHPIDDVRSAC 551
Query: 234 ELNSLYE*NSTCKTQSRDDV 293
++ L + +STC+ DDV
Sbjct: 552 RVHPLDDVHSTCRVHPLDDV 571
>UniRef50_Q9GVA8 Cluster: Erythrocyte membrane-associated antigen;
n=3; cellular organisms|Rep: Erythrocyte
membrane-associated antigen - Plasmodium falciparum
Length = 328
Score = 33.9 bits (74), Expect = 0.80
Identities = 21/96 (21%), Positives = 52/96 (54%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDV 185
N V +++N + + N + ++V +++N N+V +N++ E NS + ++V
Sbjct: 68 NKVCAVNRVNGVNKVNQVNEVNEVNEVNMVNEVNELNEVNNVNAVNEVNSVNEVNEMNEV 127
Query: 186 ICFSKLNLGNDVICFSELNSLYE*NSTCKTQSRDDV 293
++LN N+V +E+N++ E N+ + + +++
Sbjct: 128 NKVNELNEVNEVNNVNEVNNVNEVNNVNEMNNMNEM 163
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/96 (21%), Positives = 49/96 (51%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDV 185
N+V + +N L E N +DV ++++ N++ +N L E N + + +++
Sbjct: 206 NNVNEMNNMNELNEVNEVNNVNEVNDVNVVNEVDNVNEMNNMNELNEVNGVNEVHNTNEI 265
Query: 186 ICFSKLNLGNDVICFSELNSLYE*NSTCKTQSRDDV 293
+ +N+ N+V +E+N++ E N + + ++V
Sbjct: 266 NEMNNVNVVNEVNNVNEMNNMNELNEVNEVNNVNEV 301
>UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1432
Score = 33.5 bits (73), Expect = 1.1
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 114 NDVICLNSLYE*NST--CKTQSRDDVICFSKLNLGNDVICFSELNSLYE*NSTCKTQS 281
NDV+C N++ E N+ TQS +D I +N+ N+ FS +NSL N++ T S
Sbjct: 978 NDVLCNNNIIESNANIHSNTQSVNDQI---SINMINENELFSRMNSLNNNNTSIDTNS 1032
>UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_00069700;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00069700 - Tetrahymena thermophila SB210
Length = 1802
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 66 TQSRDDVICFSKLNLRNDVICLNSLY 143
+QS DD++ FSK++ ND+I NS Y
Sbjct: 1733 SQSDDDLVTFSKISNSNDIISTNSKY 1758
>UniRef50_Q9Y3Q7 Cluster: ADAM 18 precursor; n=12; Eutheria|Rep:
ADAM 18 precursor - Homo sapiens (Human)
Length = 739
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 114 NDVIC-LNSLYE*NSTCKTQSRDDVICFSKLNLGNDVICFSELNSLYE*NSTC 269
N +C L + Y N C+T F K G CF E+NSL+E + C
Sbjct: 479 NGRLCKLGTAYCYNGQCQTTDNQCAKIFGKGAQGAPFACFKEVNSLHERSENC 531
>UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1851
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRND---VICLNSLYE*NSTCKTQSR 176
+D+ +K+N L++ K D+ +K+N+ +D V +N ++ K
Sbjct: 783 HDMTLVAKVNVLHDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVS 842
Query: 177 DDVICFSKLNLGNDVICFSELNSLYE*NSTCKTQSRDDV 293
D+ +K+N+ +D+ +++N +E K D+
Sbjct: 843 HDMTLVAKVNMSHDMSLVAKVNVSHEMTLVAKVNVSHDM 881
>UniRef50_Q8IKC0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1313
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 99 KLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLGNDVICFSELNSLY 251
K N+ N+ +C+N + E N + + N+ N F E+N+LY
Sbjct: 815 KQNVSNEKLCINQMNERNKNIQIDHMNSQNKKGAYNINNSKRLFQEINNLY 865
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,278,248
Number of Sequences: 1657284
Number of extensions: 3509056
Number of successful extensions: 4825
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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