Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9d06
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81495-7|CAB04060.1|  444|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z81050-10|CAB02860.1|  329|Caenorhabditis elegans Hypothetical p...    28   7.9  
AF099919-6|AAC68803.1|  261|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z81495-7|CAB04060.1|  444|Caenorhabditis elegans Hypothetical
           protein F08G2.7 protein.
          Length = 444

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +1

Query: 112 LEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKYYFNFPPKT 279
           LEK  D+   + +     L+ EK   E   ++W+    + PF   I   F FPP T
Sbjct: 214 LEKEKDDLVKMLLQSNAKLDKEKKKTEYFKRKWQEAEHKIPFGNPIMPQFGFPPAT 269


>Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical
           protein F15A4.4 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 10  VIMFCTVCLKDRNYYMFKLF 69
           + +FC VCLK+R Y +F+ F
Sbjct: 250 IFVFCEVCLKNRLYLLFQFF 269


>AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical
           protein C09E7.5 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 94  TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKYY-FNFP 270
           TEC ICLE++ +        +T      + FH +C  +W  E    P  R +     ++P
Sbjct: 440 TECAICLEEMYN------FKETIKCECRRRFHSKCATKWLNEKRECPTCRKLMLNPSDYP 493

Query: 271 P 273
           P
Sbjct: 494 P 494


>Z81050-10|CAB02860.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.12 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -3

Query: 703 NMSFRYRDLNNCYVDALLCNSL 638
           N +FR+++L+ C++ A++ NSL
Sbjct: 188 NNNFRWKNLSYCFIGAIILNSL 209


>AF099919-6|AAC68803.1|  261|Caenorhabditis elegans Hypothetical
           protein F40G9.14 protein.
          Length = 261

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
 Frame = +1

Query: 97  ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRRE-HTRDPFNRAIKYYFNFPP 273
           EC+IC EK +  G         + N    + E CIQ  + +   + PF     Y  NF  
Sbjct: 137 ECKICFEKYEVTGN----RSPRVFNCGHTYCESCIQVCKHQFQIKCPFCTTTSYQINFST 192

Query: 274 K--TLEECNAMLRET 312
               LE  N   ++T
Sbjct: 193 NKLILEVLNGKSKDT 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,560,069
Number of Sequences: 27780
Number of extensions: 344118
Number of successful extensions: 763
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)