Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9d04
(328 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O96233 Cluster: Putative uncharacterized protein PFB070... 38 0.043
UniRef50_A7SJ37 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.17
UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2; ... 35 0.40
UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5; Plasmo... 34 0.53
UniRef50_Q9GVA8 Cluster: Erythrocyte membrane-associated antigen... 32 2.1
UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella ve... 32 2.1
UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_0006... 32 2.8
UniRef50_Q8I3X5 Cluster: Putative uncharacterized protein PFE065... 32 2.8
UniRef50_Q6LF60 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q13099 Cluster: Intraflagellar transport 88 homolog; n=... 30 8.6
>UniRef50_O96233 Cluster: Putative uncharacterized protein PFB0700c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFB0700c - Plasmodium falciparum (isolate 3D7)
Length = 972
Score = 37.9 bits (84), Expect = 0.043
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 RNDVICFSKLNSLYE*NSTCKTQSRDDVICFSK----LNLRNDVICLNSLYE*NSTCKTQ 170
++D+IC +K +++ ++DD IC +K N ++D+IC N N
Sbjct: 122 KDDIICNNKDDTMCNNKDDTICNNKDDTICNNKDDIICNNKDDIICNN-----NDDTICN 176
Query: 171 SRDDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQSRDDVI 296
++DD IC N +D IC + +++ N + DD I
Sbjct: 177 NKDDTIC----NNNDDTICNNNDDTICNNNDDTICNNNDDTI 214
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 RNDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNS---LYE*NSTCKTQS 173
++D+IC +K + + N ++DD IC N +D IC N+ + N +
Sbjct: 154 KDDIICNNKDDIICNNNDDTICNNKDDTIC----NNNDDTICNNNDDTICNNNDDTICNN 209
Query: 174 RDDVICFSKLNLRND 218
DD IC +K +L ND
Sbjct: 210 NDDTICNNKDDLMND 224
>UniRef50_A7SJ37 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 796
Score = 35.9 bits (79), Expect = 0.17
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDV--IC-LNSLYE*NSTCKTQSR 176
+DV +++ L + +STC+ DDV +++ +DV C ++ + + S C+
Sbjct: 497 DDVRSACRVHPLDDVHSTCRVHPLDDVHSTCRVHPIDDVRSTCRVHPIDDVRSACRVHPL 556
Query: 177 DDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQSRDD 290
DDV +++ +DV +++ L + +STC+ DD
Sbjct: 557 DDVHSTCRVHPLDDVRSACRVHPLDDVHSTCRVHPIDD 594
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +3
Query: 54 STCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICFS 233
S C+ DDV +++ +DV +STC+ DDV +++ +DV
Sbjct: 501 SACRVHPLDDVHSTCRVHPLDDV---------HSTCRVHPIDDVRSTCRVHPIDDVRSAC 551
Query: 234 KLNSLYE*NSTCKTQSRDDV 293
+++ L + +STC+ DDV
Sbjct: 552 RVHPLDDVHSTCRVHPLDDV 571
>UniRef50_A3FQG6 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1432
Score = 34.7 bits (76), Expect = 0.40
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 114 NDVICLNSLYE*NSTC--KTQSRDDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQS 281
NDV+C N++ E N+ TQS +D I +N+ N+ FS++NSL N++ T S
Sbjct: 978 NDVLCNNNIIESNANIHSNTQSVNDQI---SINMINENELFSRMNSLNNNNTSIDTNS 1032
>UniRef50_Q86G82 Cluster: DNA mismatch repair enzyme; n=5;
Plasmodium|Rep: DNA mismatch repair enzyme - Plasmodium
falciparum
Length = 1016
Score = 34.3 bits (75), Expect = 0.53
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 51 NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICF 230
N TC D+ I + L N++ C N ++ N TC D+ I + L N++ C
Sbjct: 287 NMTCNNLPHDNNITCNNLPHDNNITCNNIPHDNNITCNNLPHDNNITCNNLQHDNNITC- 345
Query: 231 SKLNSLYE*NSTCKTQSRDD 290
N ++ N TC D+
Sbjct: 346 --NNLPHDNNITCNNLPCDN 363
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 33 NSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLR 212
N ++ N TC D+ I + + N++ C N ++ N TC D+ I + L
Sbjct: 292 NLPHDNNITCNNLPHDNNITCNNIPHDNNITCNNLPHDNNITCNNLQHDNNITCNNLPHD 351
Query: 213 NDVIC 227
N++ C
Sbjct: 352 NNITC 356
>UniRef50_Q9GVA8 Cluster: Erythrocyte membrane-associated antigen;
n=3; cellular organisms|Rep: Erythrocyte
membrane-associated antigen - Plasmodium falciparum
Length = 328
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/96 (20%), Positives = 52/96 (54%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRDDV 185
N V +++N + + N + ++V +++N N+V +N++ E NS + ++V
Sbjct: 68 NKVCAVNRVNGVNKVNQVNEVNEVNEVNMVNEVNELNEVNNVNAVNEVNSVNEVNEMNEV 127
Query: 186 ICFSKLNLRNDVICFSKLNSLYE*NSTCKTQSRDDV 293
++LN N+V +++N++ E N+ + + +++
Sbjct: 128 NKVNELNEVNEVNNVNEVNNVNEVNNVNEMNNMNEM 163
>UniRef50_A7S854 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1851
Score = 32.3 bits (70), Expect = 2.1
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRND---VICLNSLYE*NSTCKTQSR 176
+D+ +K+N L++ K D+ +K+N+ +D V +N ++ K
Sbjct: 783 HDMTLVAKVNVLHDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVS 842
Query: 177 DDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQSRDDV 293
D+ +K+N+ +D+ +K+N +E K D+
Sbjct: 843 HDMTLVAKVNMSHDMSLVAKVNVSHEMTLVAKVNVSHDM 881
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3
Query: 6 NDVICFSKLNSLYE*NSTCKTQSRDDVICFSKLNLRND---VICLNSLYE*NSTCKTQSR 176
+D+ +K+N ++ K D+ +K+N+ +D V +N +E K
Sbjct: 819 HDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNMSHDMSLVAKVNVSHEMTLVAKVNVS 878
Query: 177 DDVICFSKLNLRNDVICFSKLNSLYE*NSTCKTQSRDDV 293
D+ +K+N+ +D+ +K+N ++ K D+
Sbjct: 879 HDMTLVAKVNVSHDMTLVAKVNVSHDMTLVAKVNVSHDM 917
>UniRef50_UPI00006CF362 Cluster: hypothetical protein TTHERM_00069700;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00069700 - Tetrahymena thermophila SB210
Length = 1802
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 66 TQSRDDVICFSKLNLRNDVICLNSLY 143
+QS DD++ FSK++ ND+I NS Y
Sbjct: 1733 SQSDDDLVTFSKISNSNDIISTNSKY 1758
>UniRef50_Q8I3X5 Cluster: Putative uncharacterized protein PFE0655w;
n=5; Eukaryota|Rep: Putative uncharacterized protein
PFE0655w - Plasmodium falciparum (isolate 3D7)
Length = 2763
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 90 CFSKLNLRNDVICLNSLYE*NSTCKTQSRDDVICFSKLNLRNDVICFSKLNSLYE*NSTC 269
C ++N ++VI +N + + N T D+VI +K+N ++VI +K+N E T
Sbjct: 2064 CIKEMNETDEVIEMNEVNKMNET------DEVIETNKMNETDEVIETNKMNETDEVIETN 2117
Query: 270 KTQSRDDVI 296
K D+VI
Sbjct: 2118 KMNETDEVI 2126
>UniRef50_Q6LF60 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 871
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 51 NSTCKTQSRDDVICFSKLNLRNDVICLNSLYE*NSTCKTQSRD--DVICFSKL--NLRN 215
NS+ S+D++IC + +N D + N E N + + + D+IC K NL+N
Sbjct: 74 NSSNNNVSKDNIICINNMNEDTDKLLKNKKDECNFNLEKEDNEIKDIICDKKFDDNLKN 132
>UniRef50_Q13099 Cluster: Intraflagellar transport 88 homolog; n=40;
Deuterostomia|Rep: Intraflagellar transport 88 homolog -
Homo sapiens (Human)
Length = 824
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 93 FSKLNLRNDVICLNSLYE*NSTCKTQSR-DDVI-CFSKLN--LRNDVICFSKLNSLYE 254
F K LRND C +LY T + +R D+ + CF KL+ LRN ++ ++YE
Sbjct: 506 FYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYE 563
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,855,920
Number of Sequences: 1657284
Number of extensions: 3527689
Number of successful extensions: 5077
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5015
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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