Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9c20
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    27   0.22 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.2  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 27.5 bits (58), Expect = 0.22
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 194 DGPQFWEQRGHEGPGTAA 141
           +GP+ W+Q+G +GPGT A
Sbjct: 241 NGPE-WQQKGPKGPGTTA 257


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 139 YAAVPGPSCPRCS 177
           +   P P CPRC+
Sbjct: 944 FGFAPSPDCPRCA 956


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 116 ETAKRNNIESYCFNI*TFFKFDFIF 42
           +T K N   +Y F+I T   F F+F
Sbjct: 137 DTDKDNTTNNYLFSIPTISLFVFLF 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,125
Number of Sequences: 2352
Number of extensions: 7559
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)