Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c20
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83216-5|CAB62782.1| 221|Caenorhabditis elegans Hypothetical pr... 28 2.5
U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 27 4.4
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 27 4.4
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 27 4.4
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF078790-1|AAC26934.1| 398|Caenorhabditis elegans Hypothetical ... 27 7.8
AF038605-1|AAK68680.1| 398|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z83216-5|CAB62782.1| 221|Caenorhabditis elegans Hypothetical
protein C08F11.7 protein.
Length = 221
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -1
Query: 344 PKLAKSVQPFSSFSETNEQQFIF-IIIKLS-LFPERFRSQAH 225
P+L+K+V+ + FS+ + Q IF I+++ F ERF+ AH
Sbjct: 93 PQLSKTVEETTDFSDQEKVQMIFGARIRMNQSFWERFKPSAH 134
>U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical
protein C50F7.9 protein.
Length = 298
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 199 WRGSLYEAQW--ACERKRSGNNDNLIIIKMNCC 291
W+ LY+ ++ A R+ SG+ND + I+ +N C
Sbjct: 247 WKKLLYDRRYFVASVRRISGSNDKISILLLNIC 279
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 635 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 676
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 712 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 753
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 722 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 763
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 726 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 767
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 784 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 825
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 742 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 783
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 750 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 791
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 635 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 676
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 712 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 753
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 722 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 763
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 726 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 767
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 784 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 825
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 742 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 783
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 750 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 791
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 QNAFARKPTVLRKVIRAITTGLNSGNS-EDTKARVLPHNYVS 128
QN F L K+++ + N+G+S E+ AR P+NY+S
Sbjct: 712 QNKFNSDMETLIKLVKEQSIIRNNGSSNEEPNARYRPNNYIS 753
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 270 Y*IIVVSRTLSLASPLCFVK*SAPSRRASILGTARTRRPGYC 145
Y I+ +S+ S P+ + S S SI+G++R +R G C
Sbjct: 15 YTIVSISQVESGVLPVSTTEISIISSETSIIGSSRVKRNGGC 56
>AF078790-1|AAC26934.1| 398|Caenorhabditis elegans Hypothetical
protein F36H12.10 protein.
Length = 398
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -1
Query: 344 PKLAKSVQPFSSFSETNEQQFIFI-IIKLSLFPERFRSQ 231
P+L K+++ +FS N+ Q++FI + L+ F E+++ +
Sbjct: 334 PELVKALRDQRAFSIQNDVQYLFIHRVMLNYFLEKYKEK 372
>AF038605-1|AAK68680.1| 398|Caenorhabditis elegans Hypothetical
protein C02B10.6 protein.
Length = 398
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -1
Query: 344 PKLAKSVQPFSSFSETNEQQFIFI-IIKLSLFPERFRSQ 231
P+L K+++ +FS N+ Q++FI + L+ F E+++ +
Sbjct: 334 PELVKALRDQRAFSIQNDVQYLFIHRVMLNYFLEKYKEK 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,530,723
Number of Sequences: 27780
Number of extensions: 155863
Number of successful extensions: 384
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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