Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9c17
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   8.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.9  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    20   8.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    20   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 357 EGENDSQEKLEEKVLEIIDGLSARA 431
           EGEND++ +  +  L +   + +RA
Sbjct: 53  EGENDARPRASQVKLNVFSIIKSRA 77


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 216 PKGKRKGKYEHRRTEQ 263
           PKG+ K +Y H   E+
Sbjct: 106 PKGEYKSRYNHFLEEE 121


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 56  FQFYVSFVVQIIL 94
           FQFY  F+V  ++
Sbjct: 149 FQFYAQFIVYFLI 161


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 375 QEKLEEKVLEIIDGL 419
           QEKL E+V  +ID +
Sbjct: 19  QEKLYEEVAAVIDNI 33


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 214 CLKGKEKENTSTEEPSKSIPQKK 282
           CL+      TS E+PS S  Q+K
Sbjct: 299 CLRAIVLFKTSFEKPSSSSNQEK 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,433
Number of Sequences: 336
Number of extensions: 1465
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)