Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c17
(435 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 0.41
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 31 0.54
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 30 0.71
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 29 1.2
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 29 1.2
07_03_1228 - 25009736-25010965 29 1.6
12_02_0761 - 22901121-22901917,22902111-22902707,22904282-229043... 29 2.2
11_06_0257 + 21746643-21748091 29 2.2
11_06_0247 - 21669299-21669348,21669673-21670012,21670110-216701... 29 2.2
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 29 2.2
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 29 2.2
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 28 2.9
12_01_0468 + 3661177-3661626 28 3.8
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 27 5.0
03_06_0304 - 33001393-33001527,33001627-33001764,33001861-330019... 27 5.0
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 27 5.0
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 27 6.6
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 6.6
03_06_0305 - 33013315-33013449,33013554-33013691,33013806-330138... 27 6.6
09_01_0019 + 403078-404211 27 8.7
04_04_0625 + 26682725-26683066,26683555-26683659,26683790-266839... 27 8.7
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 27 8.7
01_06_1485 + 37703696-37703815,37703970-37704044,37704598-377046... 27 8.7
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 225 KRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLE 404
+++ K E + + E E+ G D + E +++ + +E + D +EKLEEK E
Sbjct: 222 EKEDKEEETKKDNEKEKEQLMGTD-EKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKE 280
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 30.7 bits (66), Expect = 0.54
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 240 YEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
+E +E EED D ++ YS+ G+ D DEGE D ++ E K
Sbjct: 57 HEDEDMGEEDDEEEDGDEDDDDEEYSDEEGEDD---EDDEGEEDEEDGSEPK 105
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 30.3 bits (65), Expect = 0.71
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 255 TEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLE 404
TE+E EED G+D +G L EGE D +E L ++E
Sbjct: 112 TEEEEEEEEDDGLDPLFSETFGAAGWDPLGMPRMEGEGDEEEMLGGGLIE 161
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKV 398
+G+R Y+ +QE S E+ A N N E G + DE E D ++ E+
Sbjct: 169 RGQRLHPYQESEDDQESSEEQPAQDRRENGNDIEEDGNEEEVDGGDEAEADGDDEDGEEE 228
Query: 399 LE 404
E
Sbjct: 229 QE 230
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 261 QEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEIIDG 416
+E ++D + + +N E SD+ +D E+D E+L EK+ + +G
Sbjct: 545 EELDEDQDISDNDSEENDDELELDSDMDEENDVSESDDDEELSEKLDDSDEG 596
>07_03_1228 - 25009736-25010965
Length = 409
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/59 (22%), Positives = 27/59 (45%)
Frame = +3
Query: 234 GKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEII 410
G+ E E+E E + G + D+ E + + +E EN+ +E+ E + ++
Sbjct: 333 GEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEEEDIEEDENEEEEEEVEDTMPVV 391
>12_02_0761 -
22901121-22901917,22902111-22902707,22904282-22904358,
22906543-22907135,22907552-22908118,22908431-22908958,
22909115-22909432,22910622-22910656,22910986-22911301
Length = 1275
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 16 HVTRLNMLXSFSEISVLCFIRGPNHSLRTDIINFS 120
H + +L +++LC R P HSL +NFS
Sbjct: 656 HNATIQVLGELRNLTILCLSREPFHSLEGGELNFS 690
>11_06_0257 + 21746643-21748091
Length = 482
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +3
Query: 207 ITMPKGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKL 386
+ P G+ + R+ Y S D D +ND+ SE S ++ ++ S L
Sbjct: 311 VNTPSGELLHVWRFRQWVSSYDSSSDDQDDSSNDSSSEDQDDDSYDSSSEDQDDSSSRDL 370
Query: 387 EEKVL 401
E ++
Sbjct: 371 YEDLI 375
>11_06_0247 -
21669299-21669348,21669673-21670012,21670110-21670199,
21670280-21670339,21670564-21670856,21671176-21671245,
21671623-21671970,21673188-21673318,21673418-21673901,
21674839-21675558
Length = 861
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 231 KGKYEHRRTEQEYSSEEDAGIDMTNDNYSE---TSGQSDLXSIHDEGENDSQ 377
+G Y +++ ++E+ G D ND+ + T+ DL + D G +DS+
Sbjct: 768 EGDYSDEDDDEDDDNDEEDGFDYENDDEDDVPPTTSDGDLYNHTDFGSSDSE 819
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 282 DAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEI 407
+ + +T +N E QSD H EGE++ +E+ E + E+
Sbjct: 201 EVSVTVTEENKQEDVPQSDEVEKHKEGESNEEEEKEPEDKEM 242
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 210 TMPKGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLE 389
T RKG+++ R + Y + DAG + + SG + + E E D Q +
Sbjct: 58 TSSSSSRKGRHDDARHDGGYGDDGDAGALLASVRRLLLSGSAQDDAAEGEAEEDEQGQFP 117
Query: 390 EK 395
++
Sbjct: 118 KR 119
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +1
Query: 193 FNYRKSPCLKGKEKENTSTEEPSKSIPQKKXXXXXXXXXXXXRHLDSLTSRASMMKAKTT 372
+++ P +GKEKE S + K RHLD+ S A+ K T
Sbjct: 533 YHHSDKPAQRGKEKEENSGKNVDKRKRHDTDSDSDSHARERKRHLDARASLAAQKKRSVT 592
>12_01_0468 + 3661177-3661626
Length = 149
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 246 HRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLE 404
H E+E EE+ ++ D E + + I +E + +E+L E+V E
Sbjct: 59 HSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEEEVKEEEEELREQVQE 111
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = +3
Query: 282 DAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEIIDGLSARAN 434
DAG+D + + ++ + + ++GE++ +++ EE++ E GL + A+
Sbjct: 2040 DAGLDFSAQHQADDEMVEEEDDLGEDGEDEDEDEDEEEIAEEGAGLMSIAD 2090
>03_06_0304 -
33001393-33001527,33001627-33001764,33001861-33001938,
33002048-33002124,33003370-33003871
Length = 309
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 301 VMSMPASSSEEYSCSVLLCSYFPFLFPLGMVIYD 200
+MSM A + E SC V+L SY + G+++ D
Sbjct: 140 IMSMLAEVTPELSCPVVLFSYLGPIVRRGLIVPD 173
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +3
Query: 258 EQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
E+E ++ED D +++N+S+ G + +E E + ++
Sbjct: 431 EEELGTDEDETSDDSDENFSDEEGDEEELEEEEEEEEEEED 471
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 136 EKRRKYLENLVKLCFAFSEFNYRKSPCLKGKEKENTSTEEPSKSIPQK 279
EK++K ++ +K+ + S+F RK+ + K N+ +E SK++ K
Sbjct: 281 EKKKKLEKSQLKVGASKSQFFERKTNKIANASKSNSYEDETSKALEGK 328
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQS--DLXSIHDEGEND 371
+GK+K K E+ E++ EE+ +D DN E DL DE E +
Sbjct: 197 QGKKKKKTENWM-EEDSDEEEEEDLDEDEDNEDEEDDDEHLDLEDFDDEEEEE 248
>03_06_0305 -
33013315-33013449,33013554-33013691,33013806-33013883,
33013986-33014062,33014439-33014982
Length = 323
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 301 VMSMPASSSEEYSCSVLLCSYF 236
VMSM A + E SC V+L SYF
Sbjct: 139 VMSMLAEVTPELSCPVVLFSYF 160
>09_01_0019 + 403078-404211
Length = 377
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
+ +G+ +HRR+ + +E+D + + D ++ + S ++ E+DS +K K
Sbjct: 221 RSSSRGRSKHRRSTKRSDTEDDLEEERSKDKKKKSRRKRHERS-DEDSESDSDKKRHRK 278
>04_04_0625 +
26682725-26683066,26683555-26683659,26683790-26683951,
26684042-26684102,26684798-26684922,26685532-26685603
Length = 288
Score = 26.6 bits (56), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKV 398
KGKRK + ++EY D G D + S TS Q E + S++K ++KV
Sbjct: 63 KGKRKSRAAD--ADEEYLPS-DGGEDDDEEESSSTSDQDGEEEEDAEASSRSRKKGKKKV 119
Query: 399 L 401
L
Sbjct: 120 L 120
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKV 398
K K K KY+ ++ + + + + E + D + HD G + S++ E+ V
Sbjct: 138 KEKDKDKYKDQKKHKHRHKDRSKDKEKEKEKEKEKEKKKDKSAHHDSGADRSKKHHEKVV 197
Query: 399 LEII 410
L +
Sbjct: 198 LSTL 201
>01_06_1485 +
37703696-37703815,37703970-37704044,37704598-37704699,
37704792-37704845,37705030-37705122,37705215-37705307,
37707150-37707254,37707356-37707454,37707558-37707899
Length = 360
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 210 TMPKGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGE 365
TMPK R G + +++E EE+ + N+ E + +H GE
Sbjct: 303 TMPKSSRTGYWSDAGSDEEEKEEEERPEE--NEEEEEDEYDKRVKEVHASGE 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,003,658
Number of Sequences: 37544
Number of extensions: 141515
Number of successful extensions: 536
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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