Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c17
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 30 0.83
Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 29 1.9
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 29 1.9
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 29 1.9
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 29 1.9
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 1.9
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 29 1.9
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 28 2.5
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 27 4.4
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 27 4.4
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 27 5.9
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 27 5.9
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical... 27 5.9
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 27 5.9
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 5.9
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 5.9
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 5.9
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 5.9
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 5.9
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 27 5.9
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 5.9
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 5.9
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 5.9
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 5.9
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical pr... 27 7.8
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 27 7.8
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 27 7.8
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 27 7.8
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 27 7.8
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 27 7.8
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 27 7.8
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 27 7.8
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 27 7.8
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 27 7.8
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 27 7.8
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 29.9 bits (64), Expect = 0.83
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 261 QEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVL 401
QE SS A ID+T D+Y ET Q L + E D L E +L
Sbjct: 24 QEQSSFVTATIDLTVDDYDETEIQEILDNGKAEEGTDEDSDLVEGIL 70
>Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical
protein C03D6.5 protein.
Length = 245
Score = 28.7 bits (61), Expect = 1.9
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +3
Query: 273 SEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEE 392
++ED + ++ ++ + DL +HD+G++D +E+ ++
Sbjct: 155 TDEDPVAEPVDEEANKVFDEDDLMPLHDDGQDDDEEEEDD 194
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1088 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1141
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1135 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1188
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1137 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1190
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1088 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1141
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1135 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1188
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1137 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1190
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 202 RKSPCLKGKEKENTSTEEPSKSIP 273
RKS L K++ +TSTE PS +P
Sbjct: 109 RKSSSLMNKDEPSTSTEAPSADVP 132
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 219 KGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQE 380
KG++K K E S+ EDAG D +N Q S HD D+ +
Sbjct: 1137 KGQKKSKTGESEEHDEDSTVEDAGEDTIVENLEIKKNQETPNSEHDIEMKDASK 1190
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +3
Query: 225 KRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLE 404
K KGK R+ + SE+D + Y G+ L + + E K+LE
Sbjct: 148 KSKGKKSKRKKRNYFDSEDDDDESESETKYGGKFGKKKLEGL--QKRLRETESAMSKILE 205
Query: 405 IIDGLSARAN 434
++ + A AN
Sbjct: 206 QLESVQAGAN 215
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 231 KGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEII 410
+ K T+ E + +G+D E SD + DE E+D + E+ E++
Sbjct: 214 EAKKSKSETDAETAPSSSSGVDGVATE-EEDEDDSDKEFVADEEEDDEDAEDEQSDEEMV 272
Query: 411 DG 416
DG
Sbjct: 273 DG 274
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 231 KGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEII 410
+ K T+ E + +G+D E SD + DE E+D + E+ E++
Sbjct: 236 EAKKSKSETDAETAPSSSSGVDGVATE-EEDEDDSDKEFVADEEEDDEDAEDEQSDEEMV 294
Query: 411 DG 416
DG
Sbjct: 295 DG 296
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 273 SEEDAGIDMTNDNYSETSGQSDLXSIHDE---GENDSQEK 383
++EDA D NDN E SG D D+ G D QEK
Sbjct: 956 NQEDADGDDDNDNDGEESGADDEHQKEDDVELGVIDEQEK 995
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 273 SEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEE 392
++ED + D + + DL ++D+G+ D E+ E+
Sbjct: 155 TDEDPVAEPVEDEANRVFAEDDLMPLNDDGQEDDDEEEED 194
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 158 SKYFLRFSLNQEGEKFIISVLKE*F-GPRMKHKTEISEKLXNMFNR 24
SK++LR +L + + + E + GP ++HKTE+ + ++ R
Sbjct: 193 SKFYLRINLRDRYLETRVDEISEKYIGPALEHKTELLKIYEDLIKR 238
>AL032654-11|CAB63389.2| 529|Caenorhabditis elegans Hypothetical
protein Y52B11A.7 protein.
Length = 529
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 297 MTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKVLEIIDGL 419
M ND + S L S+HDEG D Q+ ++L DGL
Sbjct: 165 MDNDTVNILS--PSLFSLHDEGSADEQKSSLPRLLGTQDGL 203
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 273 SEEDAGIDMTNDNYSETSGQSDLXSIHDE---GENDSQEK 383
++EDA D NDN E SG D D+ G D QEK
Sbjct: 956 NQEDADGDDDNDNDGEESGADDEHQKEDDVELGVIDEQEK 995
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 622 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 655
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 603 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 636
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 659 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 692
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 613 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 646
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 613 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 646
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 613 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 646
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 622 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 655
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 613 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 646
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 603 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 636
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SPS*LSEKRRKYLENLVKLCFA---FSEFNYRKS 210
SPS LS+ R + + + +LC+ +S+ +YRK+
Sbjct: 659 SPSELSDSRNEIFKTMFQLCYCLLKYSQVSYRKN 692
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 213 MPKGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEE 392
+ + K++ K E + E+E S++D +D++ +D +++EK +E
Sbjct: 296 LKRKKQQQKQEAEKQEEEKDSDDDEKPHECDDHHHHDHEDEPEEPENDSNVPEAEEKSDE 355
Query: 393 K---VLEIIDGLSARAN 434
+ ++E ++GL N
Sbjct: 356 EQEIMMEDVEGLEGGEN 372
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 222 GKRKGKYEHRRT--EQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEE 392
G K K ++ E + +ED ID+ + N E G D D+G+ D ++ +E
Sbjct: 804 GAEKSKRNKKKDVEEDDVDMDEDDDIDLNDLNEEEDGGMED--DDEDDGDMDDDDEDDE 860
>Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical
protein C27C12.1 protein.
Length = 264
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 255 TEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEKV 398
T QE EED +++T DNY+E D SI EN + +++ +
Sbjct: 96 TFQE-KGEEDT-VEVTRDNYNEIDTVEDFRSIEPALENSPKILVDDSM 141
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 150 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 188
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 150 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 188
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 128 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 166
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 128 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 166
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 2 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 40
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 150 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 188
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 150 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 188
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 276 EEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEEK 395
E+ A ++ + N+SETSG SD + +N+ E++EEK
Sbjct: 150 EDIAPRELESLNFSETSGTSDQQADRIM-QNNENERVEEK 188
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 EHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGEND--SQEKLEEK 395
E E E E+D D +D+ E + DE E+D ++E EEK
Sbjct: 38 EEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENEEVKEEK 90
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 213 MPKGKRKGKYEHRRTEQEYSSEEDAGIDMTNDNYSETSGQSDLXSIHDEGENDSQEKLEE 392
+ + K++ K E + E+E S++D +D++ +D +++EK +E
Sbjct: 296 LKRKKQQQKQEAEKQEEEKDSDDDEKPHECDDHHHHDHEDEPEEPENDSNVPEAEEKSDE 355
Query: 393 K---VLEIIDGLSARAN 434
+ ++E ++GL N
Sbjct: 356 EQEIMMEDVEGLEGGEN 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,256,255
Number of Sequences: 27780
Number of extensions: 142242
Number of successful extensions: 671
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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