Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c11
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 123 1e-28
01_01_0166 + 1412918-1413309,1413845-1414006,1414534-1414720,141... 44 2e-04
05_07_0039 - 27239362-27239478,27240570-27241463 40 0.001
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 39 0.003
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 38 0.006
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 38 0.006
03_05_0724 - 27147479-27147706,27147830-27147920,27148002-271480... 36 0.023
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 36 0.023
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 36 0.041
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474... 36 0.041
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 33 0.22
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 31 0.67
01_01_0774 - 6004040-6004371,6004634-6005215,6005391-6005657,600... 31 0.88
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 31 1.2
09_02_0319 + 7217262-7217372,7218026-7218121,7218642-7218771,721... 31 1.2
07_03_0971 + 23038409-23039134,23040321-23040611 31 1.2
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 30 2.0
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 30 2.0
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 29 2.7
03_02_0099 - 5614007-5614233,5614725-5614998,5615086-5616179,561... 29 3.5
09_02_0587 - 10948888-10949124,10949281-10949393,10949830-109502... 29 4.7
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 6.2
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 28 8.2
01_01_0555 + 4080316-4081680 28 8.2
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 123 bits (297), Expect = 1e-28
Identities = 67/172 (38%), Positives = 93/172 (54%)
Frame = +1
Query: 148 NYKFQNLLGTVYRKGDVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTAVDI 327
NY+F NLLG YR GD +F+ D + ++S VGNR+ +L + S TL FES N T + +
Sbjct: 2 NYRFHNLLGAPYRGGDAVFAGDSSVLLSAVGNRVASTDLSASSSLTLPFESSSNVTRLAV 61
Query: 328 APNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
+P+G LL+V + G A +L VLH+ FK +AV+FSPDG AV V +
Sbjct: 62 SPSGDFLLSVDDAGRALYANLGRRAVLHRIAFKSAPSAVRFSPDGNLIAVAVGKLVQIWR 121
Query: 508 APVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVE 663
+P F E+ PF + R VT DWS S L KD T ++ V+
Sbjct: 122 SPA-FRKEFFPFHLLRTIPGFAAGVTAFDWSPDSSFLLASCKDLTARLLPVK 172
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 577 EVTCLDWSSCSRLLAVGSKDTTTKIHTV 660
+V C+ +S S+LLA G+ D K+ TV
Sbjct: 379 DVNCIAYSPDSQLLATGADDNKVKVWTV 406
>01_01_0166 +
1412918-1413309,1413845-1414006,1414534-1414720,
1415221-1415646,1416028-1416036,1416361-1416768,
1417397-1417654
Length = 613
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Frame = +1
Query: 271 NKSNTLSFES-HYNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKY---KFKQQVN 438
+KS +S +Y T+ ++P+G + + G+ +I S+ V + K + +
Sbjct: 440 HKSTVISTTKVNYTITSSAVSPDGTEAIVGAQDGKLRIYSINGDTVTEEALIEKHRGAIT 499
Query: 439 AVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLL 618
+ +SPD FA N V+ T E + + +F A + CL WS +RL+
Sbjct: 500 CIHYSPDVSMFASADANREAVVWDRA--TREIK--LKNMLFHSA--RINCLAWSPDNRLV 553
Query: 619 AVGSKDTTTKIHTVE 663
A GS DT ++ ++
Sbjct: 554 ATGSLDTCAIVYEID 568
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Frame = +1
Query: 247 ITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKF 423
+ ++NL K T E H Y AV ++P+G + + G + LT +L+K
Sbjct: 192 VKVWNLTNCKLRT-KLEGHNGYVNAVAVSPDGSLCASGGKDGTTLLWDLTEGKMLYKLDA 250
Query: 424 KQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFT-GEYRPFIMKRVFKKALDEVTCLDWS 600
++++ FSP+ + +++V + + +P + + FK + T L WS
Sbjct: 251 GAIIHSLCFSPNRYWLCAATEDSVKIWDLESKLVMQDLKPEV--QAFKSQMLYCTSLSWS 308
Query: 601 SCSRLLAVGSKDTTTKIHTV 660
+ L G D T ++ V
Sbjct: 309 ADGSTLFAGYTDGTIRVWKV 328
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = +1
Query: 247 ITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYK-F 423
I +++L++ K N +VD P G + + +I + +H YK
Sbjct: 105 IKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGH 164
Query: 424 KQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 603
+ VNA++F+PDG++ ++ V + + + FK ++ C+D+
Sbjct: 165 TRGVNAIRFTPDGRWVVSGGEDNVVKL-------WDLTAGKLLHDFKCHEGQIQCIDFHP 217
Query: 604 CSRLLAVGSKDTTTKIHTVEYLENI 678
LLA GS D T K +E E I
Sbjct: 218 HEFLLATGSSDKTVKFWDLETFELI 242
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 433 VNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCS 609
VN V FSPDG++ A D +V + TG++ F+ + +V + WS+ S
Sbjct: 388 VNHVYFSPDGQWLASASFDKSVKLWNG---ITGKF-----VAAFRGHVADVYQISWSADS 439
Query: 610 RLLAVGSKDTTTKI 651
RLL GSKD+T K+
Sbjct: 440 RLLLSGSKDSTLKV 453
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 433 VNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCS 609
VN V FSPDG++ A D +V + TG++ F+ + +V + WS+ S
Sbjct: 337 VNHVYFSPDGQWLASASFDKSVKLWNG---ITGKF-----VAAFRGHVADVYQISWSADS 388
Query: 610 RLLAVGSKDTTTKI 651
RLL GSKD+T K+
Sbjct: 389 RLLLSGSKDSTLKV 402
>03_05_0724 -
27147479-27147706,27147830-27147920,27148002-27148060,
27148197-27148312,27148389-27148472,27148677-27148824,
27148958-27149103,27149610-27149729,27149900-27149998,
27150787-27150828,27150915-27151017
Length = 411
Score = 36.3 bits (80), Expect = 0.023
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Frame = +1
Query: 196 VLFSKDGNCVIS-PVGNRITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGE 372
V FS DGN + S RI ++N S + + P G ++A +E
Sbjct: 130 VAFSSDGNLLASGSFDGRINVWNTATRTLQGTLEGSGSGFEWLKWHPRGHLIIAGSEDCN 189
Query: 373 AQIISLTTSVVLHKYK-FKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIM 549
+ + + +L+ + V F+PDGK D+ + P T + R +
Sbjct: 190 LWMWNADHNAILNTFAGHSSTVTCGDFTPDGKLICTGSDDASLRIWDPR--TAQSRHVVR 247
Query: 550 KRVFKKALDEVTCLDWSSCSRLLAVGSKDTT 642
+ D +TCL +S S+ + GSKD +
Sbjct: 248 GHGYHT--DGLTCLSVTSDSQTIVSGSKDNS 276
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 36.3 bits (80), Expect = 0.023
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +1
Query: 313 TAVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYK-FKQQVNAVKFSPDGKYFAVCC-D 486
T+V+ P G + + + +I + +H YK + + ++F+PDG++ D
Sbjct: 202 TSVEFHPFGEFFASGSSDTDLKIWDIKKKGCIHTYKGHRGAIRTIRFTPDGRWVVTGGED 261
Query: 487 NTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEY 666
N V V G+ + FK ++ C+D+ LLA GS D T K +E
Sbjct: 262 NIVKVWDLTA---GK-----LLHDFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDLET 313
Query: 667 LENI 678
E I
Sbjct: 314 FELI 317
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 35.5 bits (78), Expect = 0.041
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Frame = +1
Query: 289 SFESHYNYTA-VDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYK-FKQQVNAVKFSPDG 462
+F H + A +D P G + + +I + +H YK ++++ ++F+PDG
Sbjct: 101 TFTGHRSSCASLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDG 160
Query: 463 KYFAVC-CDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDT 639
++ DN+V + G+ + F+ + CLD+ LLA GS D
Sbjct: 161 RWIVSGGSDNSVKIWDLTA---GK-----LLHDFRNHEGPINCLDFHPHEFLLATGSADK 212
Query: 640 TTKIHTVEYLENI 678
T K +E E I
Sbjct: 213 TVKFWDLETFELI 225
>06_03_0940 +
26145746-26145879,26146740-26146821,26147349-26147427,
26147527-26147624,26148392-26148479,26148589-26148686,
26148881-26148982,26149237-26149281,26150535-26150574,
26150988-26151074,26151254-26151330,26151746-26151808,
26152650-26152766,26152905-26153116,26153690-26153785,
26153869-26153935,26154028-26154081
Length = 512
Score = 35.5 bits (78), Expect = 0.041
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 445 KFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAV 624
+FSP G YFA + TA + + +P R+ L +V C+ W +A
Sbjct: 331 EFSPVGHYFASASHDR----TARIWSMDKIQPL---RIMAGHLSDVDCVQWHVNCNYIAT 383
Query: 625 GSKDTTTKIHTVEYLENITMY 687
GS D T ++ V+ E I M+
Sbjct: 384 GSSDKTVRLWDVQTGECIRMF 404
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +1
Query: 409 HKYKF--KQQVNAVKFSPDGKYFAVC-CDNTVFVMTAPVHFTGEYRPFIMKRV---FKKA 570
H+ KF K +FSPDG+Y C D + V + +G+ + + + F
Sbjct: 211 HQTKFGKKTHPECARFSPDGQYLVSCSVDGIIEVWD---YISGKLKKDLQYQADESFMMH 267
Query: 571 LDEVTCLDWSSCSRLLAVGSKDTTTKI 651
D V +D+S S +LA GS+D K+
Sbjct: 268 DDAVLSVDFSRDSEMLASGSQDGKIKV 294
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 31.5 bits (68), Expect = 0.67
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Frame = +1
Query: 409 HKYKFKQQVNAVKFSPDGKYFAVCCDNT--VFVMTAPV-------HFTGEYRPFIMKRVF 561
H K V KFSPDGKYFA +T F A + G RP I R F
Sbjct: 122 HVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVI--RTF 179
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTK 648
+ LD+ S +L +KD T +
Sbjct: 180 YDHTQPINDLDFHPESPILISAAKDNTIR 208
>01_01_0774 -
6004040-6004371,6004634-6005215,6005391-6005657,
6005845-6006163
Length = 499
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 566 FLKTRFMMKGRYSPVKCTGAVITNTVLSQHTAKYFPSGL-NLTAFTCCLNLYLCNTTEVV 390
F++ + ++ R + KC G V+ + + + H P GL + T T C +++ + T V
Sbjct: 187 FIEEKILVAHRLAMEKCNGVVVASAIFNDHDKIRQPKGLGSETLRTVCFFMFIDDATHRV 246
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 433 VNAVKFSPDGKYFA-VCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCS 609
+NA+ FSPDG Y A V D + V F+ E F K + L C WSS
Sbjct: 342 INAISFSPDGAYLATVGRDGYLRVF----DFSKEQLIFGGKSYYGALL----CCTWSSDG 393
Query: 610 RLLAVGSKDTTTKIHTVE 663
+ L G +D ++ +++
Sbjct: 394 KYLLTGGEDDLVQVWSMD 411
>09_02_0319 +
7217262-7217372,7218026-7218121,7218642-7218771,
7219137-7219225,7219764-7219832,7220229-7220286,
7220374-7220489
Length = 222
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 334 NGMTLLAVTEK-GEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAV 477
+G T +AV K E I+ + LHK+KF ++N + ++ G F +
Sbjct: 132 HGGTQIAVGNKEDELTIVDVRKLKALHKFKFNYEINEIAWNKTGDLFFI 180
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 532 YRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
YRP+ R V+C+ +S C RLLA S D T +
Sbjct: 12 YRPYRQVRAATPHSRAVSCVRFSPCGRLLATASLDGTVAL 51
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
K +VNA+K+ P G A C D+ + + F P +++ F +L VT
Sbjct: 460 KKNSEVNAIKWDPTGSLLASCSDDWTAKTVSVMTFYTNPIPSVVQSYFILSLGGVTRTSH 519
Query: 598 SSC 606
C
Sbjct: 520 KRC 522
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 406 LHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFV 501
+HKY F ++ AV+ S D YF V + T+ V
Sbjct: 296 IHKYNFTSEIRAVRLSKD--YFVVVLEKTINV 325
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 477 VLR*YSIRDDSTGTFHRRIPALHHETCLQESPRRSDVSGLVVLLE 611
+L+ YSIR+D F R+ H+ + E P R + + V ++
Sbjct: 257 LLQQYSIRNDGGEEFRERVEPYMHQVLMYEDPMRQEAARKTVPMD 301
>03_02_0099 -
5614007-5614233,5614725-5614998,5615086-5616179,
5616674-5616772,5617371-5617389
Length = 570
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Frame = +1
Query: 172 GTVYRKGDVLFSKDGNCVISPVGNR-ITIYN-----------LKQNKSNTLSFESHYNYT 315
GTV + D++FS+DG +++ +R I +Y+ +++ SN +S+ESHY
Sbjct: 217 GTVVK--DIVFSRDGRYLLTNSNDRVIRVYDNLLPVKGSGEEIEKISSNNISYESHYE-- 272
Query: 316 AVDIAPNGMTLLAVT 360
+ NG + LA++
Sbjct: 273 --KLKANGASCLAIS 285
>09_02_0587 -
10948888-10949124,10949281-10949393,10949830-10950293,
10951223-10951766,10951902-10951971
Length = 475
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 421 FKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVF 561
+K + + + PDG+Y D M AP H +G +RP+ R F
Sbjct: 40 YKNPDDGIVYEPDGQYV----DGGENHMVAPEHQSGTFRPYSTVRSF 82
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 358 TEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYR 537
T G I+ + V +N + F DG+Y C D+ V+++ FT E
Sbjct: 82 THNGTLHILDFQGNQVKEIAAHTATINDISFDADGEYIGSCSDDGTVVISS--LFTDEKL 139
Query: 538 PFIMKRVFKK-ALD 576
F R K ALD
Sbjct: 140 KFEYHRPMKAIALD 153
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 27.9 bits (59), Expect = 8.2
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +1
Query: 313 TAVDIAPNGMTLLAVTEKGEAQIISLT--TSVVLHKYKFKQQVNAVKFSPDGKYFAVCCD 486
+AV +P+G L + + ++ S + S V + V+ + FSPDG+ A D
Sbjct: 23 SAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASD 82
Query: 487 N---TVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHT 657
+ ++ + G P +MK + CL +S +LA GS D T ++
Sbjct: 83 DRTVRIWDLGDGGGGGGGGEPRLMK-TLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWE 141
Query: 658 V 660
V
Sbjct: 142 V 142
>01_01_0555 + 4080316-4081680
Length = 454
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 565 KALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVE 663
+AL TC D S+C+ L A G TT + + E
Sbjct: 165 EALGRATCDDGSNCAYLYAYGDGSNTTGVLSTE 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,857,174
Number of Sequences: 37544
Number of extensions: 352377
Number of successful extensions: 933
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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