Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c11
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 131 4e-31
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 40 0.002
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 33 0.20
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.26
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 32 0.34
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.79
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 31 0.79
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 30 1.4
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 30 1.4
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 2.4
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 2.4
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 4.2
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 5.6
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 28 7.4
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 27 9.8
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical ... 27 9.8
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 131 bits (317), Expect = 4e-31
Identities = 60/187 (32%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
Frame = +1
Query: 139 MKFNYKFQNLLGTVYRKGDVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTA 318
M N+K N +GTVYR G V FSKDG VISP+GN+++I++L+ N S TL + +YN
Sbjct: 1 MDTNFKLSNCIGTVYRDGQVAFSKDGYSVISPIGNKLSIFDLRNNTSKTLDIDCNYNIKR 60
Query: 319 VDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVF 498
+ I+P+G LLA E+G + L + ++ ++ + + ++++SPD A+C +N +
Sbjct: 61 LSISPSGYHLLASDERGVVHFVHLLSEFKIYTFRSNKPIGSLQWSPDATRVAICRENDLQ 120
Query: 499 VMTAPVHFTGE-YRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN 675
+ + Y PF + R +K + D + +DWS + LL G +D ++ + +N
Sbjct: 121 IHEFGKSIENKVYNPFSLSRTYKLSSDSLKTIDWSDDANLLVSGGEDRVVRVVGAKDFKN 180
Query: 676 ITMYSLS 696
+ ++ L+
Sbjct: 181 LFIHPLA 187
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
+F + VK+SP FAV + + + ++ E ++ K++ K VTCLDW
Sbjct: 100 RFNRAATYVKWSPLENKFAV---GSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDW 156
Query: 598 SSCSRLLAVGSKDTTTKIHTVEYLENI 678
S + LLAVGS D ++ + Y++ +
Sbjct: 157 HSNNVLLAVGSCDFKCRVFSA-YVKEV 182
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 603
Q VN V FSPD +Y A D +V + TG+Y + V V + WS+
Sbjct: 361 QLVNQVVFSPDTRYIASASFDKSVKLWCGR---TGKYLASLRGHV-----GPVYQVAWSA 412
Query: 604 CSRLLAVGSKDTTTKI 651
SRLL GS D+T K+
Sbjct: 413 DSRLLVSGSADSTLKV 428
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Frame = +1
Query: 256 YNLKQNKSNTLSFESHYNYTAVDI--APNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQ 429
Y+L+ + + ES + Y+ D+ +P G L++ + A ++ + L +YK ++
Sbjct: 173 YDLRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSER 232
Query: 430 QVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRV-------FKKALDEVTC 588
VN+ SP+ + + +T G + I V FK +
Sbjct: 233 PVNSACISPNRDHICLGGGEDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINT 292
Query: 589 LDWSSCSRLLAVGSKDTTTKI 651
+ W ++A G +D +I
Sbjct: 293 MAWHPSGTIIATGGEDGYIRI 313
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSC 606
+ + + F+P FA D+ TA V ++ + +RV + EV C+DW
Sbjct: 218 EAIRGLAFAPTDVKFATASDDG----TARVW---DFARYTEERVLRGHGAEVRCIDWHPT 270
Query: 607 SRLLAVGSKDT 639
L+A GS+DT
Sbjct: 271 KGLIATGSRDT 281
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 550 KRVFKKALDEVTCLDW-SSCSRLLAVGSKDTTTKIHTVEYLEN 675
K VFK TCLDW ++ +L GS+D T K + + +N
Sbjct: 137 KSVFKSHERSATCLDWHATTPYILVSGSRDCTVKSYDMRVKDN 179
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +1
Query: 193 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 357
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 358 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 507
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 304 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 405
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 326 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 359
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 304 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 405
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 614 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 647
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 351 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 410
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 411 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 440
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 617 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 676
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 677 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 412 KYKFKQQVNAVKFSPDGKYFA---------VCC-DNTVFVMTAPVHFTGEYRPFIMKRVF 561
+Y+ Q + A F P G+YFA +C +T + P+ + I
Sbjct: 617 RYEDSQAIRATGFHPSGRYFALGTNSKQLHICLYPDTKRTQSRPMAYEQTKNAEIAVTRP 676
Query: 562 KKALDEVTCLDWSSCSRLLAVGSKDTTTKI 651
K+ V CL ++ LLA GS D T ++
Sbjct: 677 KQHRGSVYCLSFNPNGDLLATGSNDKTIRL 706
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 523 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 612
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Frame = +1
Query: 247 ITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKF 423
+ ++NL + T + H Y V ++P+G + + G+A + L L+
Sbjct: 180 VKVWNLGNCRLKT-NHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPG 238
Query: 424 KQQVNAVKFSPDGKYFAVCCDNTVFVM-TAPVHFTGEYRPFIMKRVFKK-ALDEVTCLDW 597
+NA+ FSP+ + +++ + E +P I + + + L W
Sbjct: 239 NDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAW 298
Query: 598 SSCSRLLAVGSKDTTTKIHTV 660
S + L G D +++ V
Sbjct: 299 SQDGQTLFAGYTDNIIRVYQV 319
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 340 MTLLAVTEKGEAQIISLTTSVVLHKYKFK---QQVNAVKFSPDGKYFAVCCDNTVFV 501
+ L+A+ E G+ +I + T F+ +VNA+ FS DGK+ V DN ++
Sbjct: 525 VALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLV-ADNDSYI 580
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 661 RRCESSLSCLSIRPPGVSSRTTSPDTS 581
R C+SSL + +PPG SS + P +S
Sbjct: 92 RECKSSLMMIGPQPPGPSSGMSMPSSS 118
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/115 (22%), Positives = 46/115 (40%)
Frame = +1
Query: 316 AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTV 495
+V+ +P+ L++ ++ S+ T Y+ V +F G YFA +
Sbjct: 399 SVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPAVVWQAQFCSRGYYFATASADK- 457
Query: 496 FVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTV 660
TA + T P R+F +V C+D+ +A GS D ++ V
Sbjct: 458 ---TAAMWSTDRMHPL---RIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDV 506
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 540 LHHETCLQESPRRSDVSGLVVLLETPGGRIERHDNEDSHRRIFREH 677
LHHE+CL+ R SDV +++ET + E++D ++ + +EH
Sbjct: 628 LHHESCLR--MRISDVDHNSLVIETERLQSEKNDLKEK-AAVIKEH 670
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/115 (22%), Positives = 46/115 (40%)
Frame = +1
Query: 316 AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTV 495
+V+ +P+ L++ ++ S+ T Y+ V +F G YFA +
Sbjct: 399 SVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPAVVWQAQFCSRGYYFATASADK- 457
Query: 496 FVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTV 660
TA + T P R+F +V C+D+ +A GS D ++ V
Sbjct: 458 ---TAAMWSTDRMHPL---RIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDV 506
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 540 LHHETCLQESPRRSDVSGLVVLLETPGGRIERHDNEDSHRRIFREH 677
LHHE+CL+ R SDV +++ET + E++D ++ + +EH
Sbjct: 628 LHHESCLR--MRISDVDHNSLVIETERLQSEKNDLKEK-AAVIKEH 670
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/102 (27%), Positives = 43/102 (42%)
Frame = +1
Query: 355 VTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEY 534
+T+K E SL ++ H + V+ +KFS GKY + + V T
Sbjct: 194 ITKKPENGEFSLVKTISGHT----KSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMT--- 246
Query: 535 RPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTV 660
++ + L + WSS S+ +A S DTT KI V
Sbjct: 247 ---YLQTLASHQLG-INDFSWSSNSQFIASASDDTTVKIFDV 284
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 427 QQVNAVKFSPDGKYFAV-CCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 603
+ +++ KFSP GKY D TV + H I +R V + WSS
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMD-H-------MICERTLTGHKLGVNDIAWSS 139
Query: 604 CSRLLAVGSKDTTTKIHTV 660
SR + S D T KI +
Sbjct: 140 DSRCVVSASDDKTLKIFEI 158
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
K V+A+ FSPDG++ A + + V TG+ R + K A +++ L W
Sbjct: 70 KLDSSVSALHFSPDGRFLAAATSKGI-IHLLDVE-TGKVRFSV-----KAASEKIAKLHW 122
Query: 598 SSCSRLLAVGS-KDTTTKIHTVEYLE 672
+ + + + TT+I VE +E
Sbjct: 123 NCVREKPFISNLGEFTTRIKNVEAIE 148
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 597
K V+A+ FSPDG++ A + + V TG+ R + K A +++ L W
Sbjct: 70 KLDSSVSALHFSPDGRFLAAATSKGI-IHLLDVE-TGKVRFSV-----KAASEKIAKLHW 122
Query: 598 SSCSRLLAVGS-KDTTTKIHTVEYLE 672
+ + + + TT+I VE +E
Sbjct: 123 NCVREKPFISNLGEFTTRIKNVEAIE 148
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 205 SKDGNCVISPVGNRITIYNLKQ-NKSNTLSFESHY-NYTAVDIAPNGMTLLAVTEKGEAQ 378
S DG +++ VG +Y ++ N +++F+ Y + ++P + + G
Sbjct: 83 SVDGKYMVA-VGMNSIVYEVELVNTVKSMAFDFGYLDAVFCAVSPLKTGYVTASYSGHLN 141
Query: 379 IISLTTSVVLHKYKFK--QQVNAVKFSPDGKYFAV 477
I +++ ++ + F +Q++ +K+S D KY A+
Sbjct: 142 EIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAI 176
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 205 SKDGNCVISPVGNRITIYNLKQ-NKSNTLSFESHY-NYTAVDIAPNGMTLLAVTEKGEAQ 378
S DG +++ VG +Y ++ N +++F+ Y + ++P + + G
Sbjct: 83 SVDGKYMVA-VGMNSIVYEVELVNTVKSMAFDFGYLDAVFCAVSPLKTGYVTASYSGHLN 141
Query: 379 IISLTTSVVLHKYKFK--QQVNAVKFSPDGKYFAV 477
I +++ ++ + F +Q++ +K+S D KY A+
Sbjct: 142 EIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAI 176
>AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical
protein T01G6.5 protein.
Length = 383
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 492 CIIAAHGKVFSIRTKLNRXXXXXXXXXXXXHR-SCKTYNLCFTLFRNSQQCHSIWCNINS 316
C AHG+ F T L+ R SCK+ N C N QC S C +
Sbjct: 8 CDAPAHGRHFGALTCLSCAAFFRRAIFAKKKRKSCKSGNKCRDFNGNFPQCKS--CRMRK 65
Query: 315 CIIV 304
C+ V
Sbjct: 66 CLRV 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,310,240
Number of Sequences: 27780
Number of extensions: 345292
Number of successful extensions: 942
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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