Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9c06
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 213 3e-54
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 184 2e-45
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 135 1e-30
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 132 1e-29
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 124 2e-27
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 119 8e-26
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 101 2e-20
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 81 3e-14
UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californ... 81 3e-14
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 78 2e-13
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 76 1e-12
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 76 1e-12
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 74 4e-12
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 73 9e-12
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 69 8e-11
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 66 1e-09
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 63 7e-09
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 62 1e-08
UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF... 50 5e-05
UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum granuloviru... 48 3e-04
UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorim... 47 4e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 46 0.001
UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostel... 45 0.002
UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana granulovir... 44 0.005
UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -... 37 0.55
UniRef50_A2FBT1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|R... 34 3.9
UniRef50_Q239Z2 Cluster: Calpain family cysteine protease contai... 33 6.7
UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precurso... 33 6.7
UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1; ... 27 7.1
UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI061... 33 8.9
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 213 bits (521), Expect = 3e-54
Identities = 98/101 (97%), Positives = 101/101 (100%)
Frame = -1
Query: 305 MDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 126
MD+G+F+IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 60
Query: 125 NNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLP 3
NNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLP
Sbjct: 61 NNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLP 101
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 184 bits (447), Expect = 2e-45
Identities = 84/124 (67%), Positives = 100/124 (80%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 503
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 504 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 683
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHL
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHL 119
Query: 684 IYNN 695
IY+N
Sbjct: 120 IYDN 123
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 135 bits (326), Expect = 1e-30
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 503
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 504 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 683
KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHI 119
Query: 684 IYNNE 698
IY N+
Sbjct: 120 IYEND 124
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 132 bits (318), Expect = 1e-29
Identities = 60/124 (48%), Positives = 84/124 (67%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 503
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 504 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 683
KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHM 119
Query: 684 IYNN 695
IY+N
Sbjct: 120 IYDN 123
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 124 bits (299), Expect = 2e-27
Identities = 61/123 (49%), Positives = 77/123 (62%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 503
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 504 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 683
KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTES--NRVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 684 IYN 692
IY+
Sbjct: 117 IYD 119
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 119 bits (286), Expect = 8e-26
Identities = 57/124 (45%), Positives = 73/124 (58%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 503
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 504 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 683
KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHM 119
Query: 684 IYNN 695
IY N
Sbjct: 120 IYEN 123
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 101 bits (242), Expect = 2e-20
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +3
Query: 324 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 497
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 498 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 677
+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L+
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVL 119
Query: 678 HLIYNN 695
HLIYNN
Sbjct: 120 HLIYNN 125
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 81.0 bits (191), Expect = 3e-14
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = -1
Query: 284 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI-ISS 108
+E+EISYSINFSQDLLY +LN+YI N+ L ++Y D D N RTR+ + S N I I S
Sbjct: 19 LEREISYSINFSQDLLYILLNAYISNNFVLHEKYTDFVDVNDVRTRLSVDSNTNKIKIVS 78
Query: 107 VKKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
KT ++FVY + N LVPLV R + E
Sbjct: 79 TLKTPQSLRRFVY--INGNGLVPLVDRTAVE 107
>UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 64
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 3 RQFDFFALSPHQRHQRVGIFRPINKFFVFGISLFHA 110
RQFDFFA SPHQRHQRVGIFRPINKFFVFGISLFHA
Sbjct: 29 RQFDFFAFSPHQRHQRVGIFRPINKFFVFGISLFHA 64
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 77.8 bits (183), Expect = 2e-13
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = +3
Query: 345 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 515
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 516 PIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIY 689
I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 62 EIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIY 117
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +3
Query: 369 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 542
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 543 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNE 698
F M I + L+ +RI+IP +N+ + +M E+ +F+ IY +
Sbjct: 71 FDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFVFYSIYERQ 122
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 75.8 bits (178), Expect = 1e-12
Identities = 46/90 (51%), Positives = 54/90 (60%)
Frame = -1
Query: 284 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 105
IEKEISYS+N SQDLLYKIL +YI ++L Q+Y D DEN RTRI I SV
Sbjct: 6 IEKEISYSVNVSQDLLYKILTTYISKKFTLTQEYIDCVDENNVRTRIVADQ-----IKSV 60
Query: 104 KKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
K +KFV+ D +VPLV R S E
Sbjct: 61 FKIPQSLQKFVH--VDKTIVVPLVKRVSIE 88
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = -1
Query: 296 GNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI 117
G IEKEISYSIN SQDLL+ IL SYI N+ L+ +YF+ +EN R+R+
Sbjct: 19 GVVTIEKEISYSINLSQDLLFIILESYISKNFVLSCEYFECVNENDVRSRL----TGGRF 74
Query: 116 ISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
+S++K+T S +KFVY N L+PLV R S E
Sbjct: 75 VSTIKQTESL-RKFVY--VHENGLMPLVDRVSSE 105
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 72.5 bits (170), Expect = 9e-12
Identities = 43/90 (47%), Positives = 51/90 (56%)
Frame = -1
Query: 284 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 105
+EKEISY+IN SQDLLY I NSYIV + QY DL D N RTR + SV
Sbjct: 3 LEKEISYTINLSQDLLYIIFNSYIVKHMDYRTQYCDLIDCNDVRTRFE-----RGTVQSV 57
Query: 104 KKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
K N K+F ++ DT +V LV R S E
Sbjct: 58 HKKNVFMKRFAHYVNDTATIVGLVDRHSIE 87
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +3
Query: 369 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 539
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 540 QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYN 692
FK + L+ RI IP+ NY N+ +M E+ +F+ IY+
Sbjct: 76 SFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYD 126
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 65.7 bits (153), Expect = 1e-09
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Frame = +3
Query: 339 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 500
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 501 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 677
K I DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 678 HLIYNNE 698
+ IYN++
Sbjct: 123 YTIYNDK 129
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 62.9 bits (146), Expect = 7e-09
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Frame = -1
Query: 287 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQS-------- 132
++EKEISY++N SQDLLY I ++YI + Q+Y D+ D +G R+RI +Q
Sbjct: 3 IVEKEISYTVNVSQDLLYIIFDTYISEKFQFKQEYRDVTDNDGVRSRILVQDDGGDDGDG 62
Query: 131 ---ACNNIISSVKKTNSKHKKFVYWPKDTNALVPLV 33
N I VKK+ ++FVY ++LVPL+
Sbjct: 63 KIVIDNGTICRVKKSTKSTERFVY--LSGHSLVPLI 96
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 62.1 bits (144), Expect = 1e-08
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Frame = +3
Query: 369 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 533
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 534 DNQFKMTIARHLVGNKERGI---KRILIP-SATNYQEVFNLNSMMQAEQLIFHLIYNNE 698
+ FKM + + LV E+ KR+LIP S + + + S+M E+ +F+ IY +E
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKRLLIPMSVDDVRLAVSSRSLM--ERFVFYTIYEDE 128
>UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF95
LEF-4 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 480
Score = 50.0 bits (114), Expect = 5e-05
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = -1
Query: 281 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 102
E+E+SY+ +SQD+LY+ L ++ N AQ Y ++YD N RTRI ++S+VK
Sbjct: 5 EQEVSYTFTYSQDVLYR-LKGWLDANLCDAQSYVEVYDTNDVRTRI----YDGGVMSTVK 59
Query: 101 KTNSKHKKFVYWPKDTNALVPLVWRESKE 15
K + + V D VP++ RE E
Sbjct: 60 KRLVESGRVVVMVGDN--FVPMINRECHE 86
>UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum
granulovirus|Rep: ORF85 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 468
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/89 (35%), Positives = 52/89 (58%)
Frame = -1
Query: 281 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 102
E EISY+ F QD+LY I N ++ ++S+ ++Y ++ D+N R+RI I + I SVK
Sbjct: 7 EFEISYTFTFPQDMLYLIKN-FLDKHFSIKEEYVEVLDKNNVRSRIFI----DGTIKSVK 61
Query: 101 KTNSKHKKFVYWPKDTNALVPLVWRESKE 15
K+ + + V P + VP++ RE E
Sbjct: 62 KSVVESGRCVV-PL-VDGFVPMIERECDE 88
>UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorimaea
operculella granulovirus|Rep: Late expression factor 4 -
Phthorimaea operculella granulovirus
Length = 441
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = -1
Query: 281 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 144
E+E+SY+ +SQD+LY+ L ++ N + + +Y ++YDEN RTRI
Sbjct: 5 EQEVSYTFTYSQDVLYR-LADWLEANMTKSDEYVEMYDENDTRTRI 49
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 369 NRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS-KMVLPIFDEDDNQF 545
N CIF D P + + G +IC HL F++S + + + D +
Sbjct: 28 NECIFRYARENDKLNQTIDPGYNCSNYLSGLYICQKHLEDYFRLSLRKINQLEGTDQGRV 87
Query: 546 --KMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNE 698
++++ L N R+++P+ NY+++F + + + QL+FHL+Y N+
Sbjct: 88 FERLSVLSRLPHNYRN---RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQ 137
>UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF78 peptide - Plutella xylostella
granulovirus
Length = 432
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = -1
Query: 287 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 144
MIE E+SY+ + QD+LY I + + ++Y ++ DENG+RTR+
Sbjct: 1 MIEHEVSYTFTYPQDVLYSI-KALFDQRLQVVEEYVEIIDENGYRTRM 47
>UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana
granulovirus|Rep: Lef-4 - Adoxophyes orana granulovirus
(AoGV)
Length = 452
Score = 43.6 bits (98), Expect = 0.005
Identities = 32/98 (32%), Positives = 52/98 (53%)
Frame = -1
Query: 308 NMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSA 129
N D+ N + E+EI+Y+ +SQD++YKI N ++ N L + Y ++ D + RTRI
Sbjct: 4 NCDN-NCVKEQEIAYTFAYSQDVIYKI-NDWLQQNVKLHETYVEIIDCDNLRTRI----Y 57
Query: 128 CNNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
N ++KK + + D +VP+V RE E
Sbjct: 58 ENGKSVTIKKEIVDSSRLLVVLSDN--IVPMVKRECSE 93
>UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 447
Score = 36.7 bits (81), Expect = 0.55
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -1
Query: 281 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI---PIQSACNNIIS 111
E E+SY++ QDLLYKI Y+ + + Y ++ D N RTR+ ++S ++
Sbjct: 11 EYEMSYTLTLPQDLLYKI-KQYLDKRFFNKECYVEIIDVNHTRTRLQDSKLESVTKRLVD 69
Query: 110 SVK 102
S K
Sbjct: 70 SNK 72
>UniRef50_A2FBT1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1127
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/97 (19%), Positives = 47/97 (48%)
Frame = -1
Query: 323 IVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 144
I+ ++ + + ++++E S N Q+LL K + Y + + + ++ + +I
Sbjct: 462 ILTILIIHNHEHIVKREFSNEFNTLQNLLSK--SEYHITVFEAVEGKLKWKSQSNKKPKI 519
Query: 143 PIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPLV 33
P + I+ ++K+ + H +W ++ N +V LV
Sbjct: 520 PFEVVFRRILVALKEKDLTHFYLSFWDENNNKVVVLV 556
>UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 356
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 320 VAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYI---VPNYSLAQQYFDLYDENGFRT 150
+ V+N +F+ + ++Y +N+ +Y ++ I ++SL Q Y D++D+ R
Sbjct: 113 IEVVNRLRKDFVYDTLLNYGVNYDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERM 172
Query: 149 RIPIQSACNNIISSVK 102
+ +Q+ C ++
Sbjct: 173 KDALQADCTRYAPGIE 188
>UniRef50_Q239Z2 Cluster: Calpain family cysteine protease containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Calpain
family cysteine protease containing protein - Tetrahymena
thermophila SB210
Length = 1254
Score = 33.1 bits (72), Expect = 6.7
Identities = 30/117 (25%), Positives = 53/117 (45%)
Frame = -1
Query: 410 ARVERHDGRENAAVNSHLSRRHTHGH*RHIVAVINMDHGNFMIEKEISYSINFSQDLLYK 231
++V DG+ N + +R R I N+ GN++I+ +I + N +
Sbjct: 1076 SQVTGPDGKPNQRYIGAIQKRD-----REIFVECNLTPGNYLIQSKIFWETNAA------ 1124
Query: 230 ILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPK 60
NSY+V Y +AQ D D+N P + C +I +K ++K K+ +P+
Sbjct: 1125 --NSYVVSTYGVAQTKLDQVDKNQVP---PFMNEC--LIQKARK-STKLKQLRQYPE 1173
>UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precursor;
n=10; Haemophilus influenzae|Rep: Uncharacterized
protein HI0178 precursor - Haemophilus influenzae
Length = 160
Score = 33.1 bits (72), Expect = 6.7
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -1
Query: 326 HIVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDE 165
H AV+N+D G ++ + Y+ + Q YKILN NY L Q D YDE
Sbjct: 67 HFDAVVNLDRGLYVYPEPKRYARSVRQ---YKILN---CANYHLTQIRTDFYDE 114
>UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 937
Score = 27.1 bits (57), Expect(2) = 7.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 542 LIVVFVENGQNHF*HFKTFDEVAVADKPSVVMIRVGRTR*LVCYARV 402
+ ++ N HF + KT V D P++ +IR R ++C ++
Sbjct: 43 MFAIYGGNAPGHFDNPKTKTTRVVLDMPNITIIRSRRPNAIMCIIKI 89
Score = 24.6 bits (51), Expect(2) = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 323 IVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIV 210
I+ +I + HGN YS+ SQ++L IL + ++
Sbjct: 83 IMCIIKIVHGNNSATSAGYYSLQKSQEMLKMILGNNLM 120
>UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI0615w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0615w - Plasmodium falciparum
(isolate 3D7)
Length = 906
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 YCKRSE*VYECESRFRRTNRNIVV-PANN*EQYKNLKFYTTNLG*NLLNKR 271
Y K E + C RF++TNR I++ NN E F+T N+ N++ R
Sbjct: 573 YRKEKENLKLCFVRFKKTNRCIIIKEKNNEEDNLQSTFFTENIKSNIIKSR 623
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,135,214
Number of Sequences: 1657284
Number of extensions: 12868496
Number of successful extensions: 31613
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31594
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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