Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9c03
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069647-1|AAL39792.1|  337|Drosophila melanogaster LD41395p pro...   209   2e-54
AE014296-2974|AAF49295.1|  337|Drosophila melanogaster CG5546-PA...   209   2e-54
AY058787-1|AAL14016.1|  525|Drosophila melanogaster SD08430p pro...    30   3.2  
AE014296-2800|AAN11741.1|  525|Drosophila melanogaster CG9706-PB...    30   3.2  
AE014296-2799|AAF49413.1|  525|Drosophila melanogaster CG9706-PA...    30   3.2  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   5.6  

>AY069647-1|AAL39792.1|  337|Drosophila melanogaster LD41395p
           protein.
          Length = 337

 Score =  209 bits (511), Expect = 2e-54
 Identities = 108/172 (62%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = +1

Query: 145 SPKSSPRGA-RSPVVSRQDSSGTLKTTISLGKNPSIVHSGPFYLMKEPPGECELTGATNL 321
           SPKSSP G  RSPVV+RQDSSGTLKTTISLGK P+I+H+GPFY MKEPP + ELTG  +L
Sbjct: 11  SPKSSPHGGGRSPVVARQDSSGTLKTTISLGKTPTIIHTGPFYSMKEPPAKAELTGDKDL 70

Query: 322 MAYYGLVHSYSKFNGKKLKESLSSFLPNLPGIVDGPGQD-DNSTLSSVIAKRPIGGKELL 498
           M  YGL H+ +KF  KK KESL+SFL N+PGI D      +NSTL SVI K PIGGKELL
Sbjct: 71  MTEYGLHHTLTKFKEKKFKESLASFLQNIPGINDLITHPVENSTLRSVIEKPPIGGKELL 130

Query: 499 PLTSAQLAGFRLHPGPLPEQYRYVSATPPXXXXXXXXXXXXXDGAPPGARDT 654
           PLT  QLAGFRLHPGPLPEQYR    TP              DG   G   T
Sbjct: 131 PLTPVQLAGFRLHPGPLPEQYRTTYVTPARKHKNKHKKQKHKDGVTTGQEST 182


>AE014296-2974|AAF49295.1|  337|Drosophila melanogaster CG5546-PA
           protein.
          Length = 337

 Score =  209 bits (511), Expect = 2e-54
 Identities = 108/172 (62%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = +1

Query: 145 SPKSSPRGA-RSPVVSRQDSSGTLKTTISLGKNPSIVHSGPFYLMKEPPGECELTGATNL 321
           SPKSSP G  RSPVV+RQDSSGTLKTTISLGK P+I+H+GPFY MKEPP + ELTG  +L
Sbjct: 11  SPKSSPHGGGRSPVVARQDSSGTLKTTISLGKTPTIIHTGPFYSMKEPPAKAELTGDKDL 70

Query: 322 MAYYGLVHSYSKFNGKKLKESLSSFLPNLPGIVDGPGQD-DNSTLSSVIAKRPIGGKELL 498
           M  YGL H+ +KF  KK KESL+SFL N+PGI D      +NSTL SVI K PIGGKELL
Sbjct: 71  MTEYGLHHTLTKFKEKKFKESLASFLQNIPGINDLITHPVENSTLRSVIEKPPIGGKELL 130

Query: 499 PLTSAQLAGFRLHPGPLPEQYRYVSATPPXXXXXXXXXXXXXDGAPPGARDT 654
           PLT  QLAGFRLHPGPLPEQYR    TP              DG   G   T
Sbjct: 131 PLTPVQLAGFRLHPGPLPEQYRTTYVTPARKHKNKHKKQKHKDGVTTGQEST 182


>AY058787-1|AAL14016.1|  525|Drosophila melanogaster SD08430p
           protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 326 AIKFVAPVSSHSPGGSFIK*NGPLCTIDGFLPKDIVVLSVPEESWRETTGD 174
           A+ F A +S  + GG+++     LC + G  P  +V+  V   +W++ + +
Sbjct: 406 AMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVDVLTWKQCSNN 456


>AE014296-2800|AAN11741.1|  525|Drosophila melanogaster CG9706-PB,
           isoform B protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 326 AIKFVAPVSSHSPGGSFIK*NGPLCTIDGFLPKDIVVLSVPEESWRETTGD 174
           A+ F A +S  + GG+++     LC + G  P  +V+  V   +W++ + +
Sbjct: 406 AMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVDVLTWKQCSNN 456


>AE014296-2799|AAF49413.1|  525|Drosophila melanogaster CG9706-PA,
           isoform A protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 326 AIKFVAPVSSHSPGGSFIK*NGPLCTIDGFLPKDIVVLSVPEESWRETTGD 174
           A+ F A +S  + GG+++     LC + G  P  +V+  V   +W++ + +
Sbjct: 406 AMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVDVLTWKQCSNN 456


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 385 LSSFLPNLPGIVDGPGQDDNSTLSSVIAK 471
           L + L NL G  +GPG D+ STL   IAK
Sbjct: 49  LENELANLNGSEEGPGLDELSTLEREIAK 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,101,642
Number of Sequences: 53049
Number of extensions: 674436
Number of successful extensions: 1207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)