Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9c02
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122136-1|AAM52648.1|  418|Drosophila melanogaster GM12605p pro...   149   5e-36
AE014298-1877|AAF48249.1|  398|Drosophila melanogaster CG1622-PA...   149   5e-36
AE014134-1504|AAN10666.1|  108|Drosophila melanogaster CG31894-P...    29   6.2  

>AY122136-1|AAM52648.1|  418|Drosophila melanogaster GM12605p
           protein.
          Length = 418

 Score =  149 bits (360), Expect = 5e-36
 Identities = 73/140 (52%), Positives = 81/140 (57%)
 Frame = +1

Query: 223 FISVHLFKLKTYHEVVDEIYYQVKHLEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFC 402
           +  VHLFKLKTYHEVVDEIYYQVKH+EPWERGSRKTS                  STA+C
Sbjct: 48  YFKVHLFKLKTYHEVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGGIVSTAYC 107

Query: 403 XXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXP 582
                        Q+NGLL HTDS YIRALGFMY+RYTQPP DL                
Sbjct: 108 LLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQPPGDLYDWYEDYLQDEEEIDV 167

Query: 583 RAGGGASTTIGALVRQMLVK 642
           +AGGG   TIG +V Q + K
Sbjct: 168 KAGGGQVLTIGQMVYQFMTK 187



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 641 KLDWFSTLFPRIPVPIXK 694
           KLDWFSTLFPRIPVPI K
Sbjct: 187 KLDWFSTLFPRIPVPIQK 204


>AE014298-1877|AAF48249.1|  398|Drosophila melanogaster CG1622-PA
           protein.
          Length = 398

 Score =  149 bits (360), Expect = 5e-36
 Identities = 73/140 (52%), Positives = 81/140 (57%)
 Frame = +1

Query: 223 FISVHLFKLKTYHEVVDEIYYQVKHLEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFC 402
           +  VHLFKLKTYHEVVDEIYYQVKH+EPWERGSRKTS                  STA+C
Sbjct: 48  YFKVHLFKLKTYHEVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGVRGVGAGGIVSTAYC 107

Query: 403 XXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXP 582
                        Q+NGLL HTDS YIRALGFMY+RYTQPP DL                
Sbjct: 108 LLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQPPGDLYDWYEDYLQDEEEIDV 167

Query: 583 RAGGGASTTIGALVRQMLVK 642
           +AGGG   TIG +V Q + K
Sbjct: 168 KAGGGQVLTIGQMVYQFMTK 187



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 641 KLDWFSTLFPRIPVPIXK 694
           KLDWFSTLFPRIPVPI K
Sbjct: 187 KLDWFSTLFPRIPVPIQK 204


>AE014134-1504|AAN10666.1|  108|Drosophila melanogaster CG31894-PA
           protein.
          Length = 108

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 427 GECTACRGDRKQWTQFHQHPHLVR 356
           G C  C    K+W Q H+H H  R
Sbjct: 4   GRCCVCSYAAKKWRQTHKHTHQTR 27


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,959,649
Number of Sequences: 53049
Number of extensions: 561703
Number of successful extensions: 1233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)