Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b21
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    30   0.082
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   7.2  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   7.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   7.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.5  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 241 GARQCDGVRADVGCAHEPGRDAGCRAAGP 327
           GAR   G+R DVG    PGRD      GP
Sbjct: 758 GARGLQGLRGDVGPEGRPGRDGAPGLPGP 786


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 272 TSGAHMNPAVTLAAALQGRMSPA 340
           T+GAH +  VT+   L GR+  A
Sbjct: 62  TNGAHPSKCVTIQRTLDGRLQVA 84


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 619 PGENQPGHHESQLHGHH 569
           PG +Q  HH    H HH
Sbjct: 178 PGHSQHHHHHHHHHPHH 194


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 246 STTNPKAKAGCDSTTASFPLYGTTELTPSHTRN 148
           + T P A      T    P  G  +  PSHT+N
Sbjct: 501 AATQPNASVPMFETNLPGPSNGWVQPVPSHTQN 533


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -3

Query: 196 LPFVRHHGADAEPHEERRGQQLGDQRSPPSPHP 98
           +P   H  +   PH     Q LG   S  SP P
Sbjct: 153 VPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEP 185


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -3

Query: 196 LPFVRHHGADAEPHEERRGQQLGDQRSPPSPHP 98
           +P   H  +   PH     Q LG   S  SP P
Sbjct: 153 VPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEP 185


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 147 AVASSSETSARHHRRTQPDK 88
           AVAS S   A+HH +  P+K
Sbjct: 748 AVASVSHWMAQHHLQIAPEK 767


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 655 TSRVQASSRRVSPGENQPGHHESQLHGHHR 566
           +S  Q S +  S    QP H     H HH+
Sbjct: 261 SSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 655 TSRVQASSRRVSPGENQPGHHESQLHGHHR 566
           +S  Q S +  S    QP H     H HH+
Sbjct: 261 SSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 655 TSRVQASSRRVSPGENQPGHHESQLHGHHR 566
           +S  Q S +  S    QP H     H HH+
Sbjct: 213 SSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,201
Number of Sequences: 2352
Number of extensions: 10410
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)