Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b19
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.39 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.2  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    24   1.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 576 YSLLFH*FYTFLLVVYRSFHQSLPAPVTNELL--FSHFLQLYVTRDLLHQLSTTIPIHHV 403
           + +LF+    F+++VY +     P PVTN  L  F+ F +L +   L+  LS T      
Sbjct: 324 FIILFY-LSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLLI---LVVSLSGTFGFFGT 379

Query: 402 HFTSF 388
           H  S+
Sbjct: 380 HILSY 384


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = -1

Query: 147 RTRAHYNFF*HFKSV*SINCIKYLIRCFTLLYKLQNWTQ 31
           R   H      F    S+ C  Y +   T  YK + WT+
Sbjct: 58  RNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTWTR 96


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = -1

Query: 537 VVYRSFHQSLPAPVTNELLF-----SHFLQLYVTRDLLHQL 430
           VV R F +     V++ L F     SHF++ YVT + L+Q+
Sbjct: 67  VVAREFDKIQVGDVSSVLKFIRKYGSHFIESYVTGNALYQV 107


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 87  IKYLIRCFTLLYKLQNWT 34
           +K+L RC  L  +L  WT
Sbjct: 677 LKFLSRCRLLSERLTRWT 694


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 445 SPSPALHYHPYTPCSLHKFLRCTSAAGLTQS 353
           S SPA   +PY   + H      +A G   S
Sbjct: 53  STSPAARMYPYVSAAHHHHQAAAAAFGAAAS 83


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 445 SPSPALHYHPYTPCSLHKFLRCTSAAGLTQS 353
           S SPA   +PY   + H      +A G   S
Sbjct: 53  STSPAARMYPYVSAAHHHHQAAAAAFGAAAS 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,405
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)