Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b19
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.80 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.6  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.8  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -1

Query: 627 NGYNHLESLTESPECI*YSLLFH*FYTFLLVVYRSFHQSLPAPVTNELL 481
           N +++  S  E  E   +  +F+  Y  ++ +Y+ + QSLP    N+L+
Sbjct: 413 NIWDYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQYQQSLPVYQYNDLI 461


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 184 DYTIVPYEDSRCKIK 228
           D T  P++D RC++K
Sbjct: 151 DITWFPFDDQRCEMK 165


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 532 HHKEKGVELVKEKRILD 582
           +HKE  +ELV+E+ + D
Sbjct: 156 YHKELQIELVREEILFD 172


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 85  LSNNYKYSNYNNYNN 99


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 437 TSSPLPSLYTMFTSQVSP 384
           +SSP PS  + F S VSP
Sbjct: 88  SSSPSPSSPSSFFSSVSP 105


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 318 LSNNYKYSNYNNYNN 332


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 657 LSNDFRINRFNGYNH 613
           LSN+++ + +N YN+
Sbjct: 318 LSNNYKYSNYNNYNN 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,502
Number of Sequences: 438
Number of extensions: 4010
Number of successful extensions: 31
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)