Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b04
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB77CF Cluster: PREDICTED: similar to CG8326-PA;...    47   4e-04
UniRef50_UPI0000D56E11 Cluster: PREDICTED: similar to CG8326-PA;...    43   0.009
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-...    36   0.75 
UniRef50_Q7X2C6 Cluster: 4-vinyl protochlorophyllide reductase; ...    35   1.7  
UniRef50_Q1NQB4 Cluster: (1,4)-alpha-D-glucan 1-alpha-D-glucosyl...    35   1.7  
UniRef50_Q3JIV0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q4N220 Cluster: Diaphanous protein, putative; n=2; Thei...    33   5.3  
UniRef50_Q7EY54 Cluster: Putative uncharacterized protein OSJNBb...    33   9.2  

>UniRef50_UPI0000DB77CF Cluster: PREDICTED: similar to CG8326-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG8326-PA
           - Apis mellifera
          Length = 247

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 66  MGRKIPAKKHRGVKDPLVQQARREQRL 146
           MGRKIP KKHRGVKDP  QQA+R+  L
Sbjct: 1   MGRKIPGKKHRGVKDPFKQQAKRQAEL 27


>UniRef50_UPI0000D56E11 Cluster: PREDICTED: similar to CG8326-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG8326-PA - Tribolium castaneum
          Length = 267

 Score = 42.7 bits (96), Expect = 0.009
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 66  MGRKIPAKKHRGVKDPLVQQARREQRL 146
           MGRKIP +KHRGV+DP  Q+A RE+ L
Sbjct: 1   MGRKIPGRKHRGVRDPEKQRAEREKSL 27



 Score = 36.3 bits (80), Expect = 0.75
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 476 QEDSEPQLNRNQRLAQKKKEXKMKALDAASEKCEVVYEHVPFGELAHAPPAL 631
           +++  P+L ++Q+   K  E K K ++   ++ E   + V FGE  H PP L
Sbjct: 145 KKEEGPKLTKSQKRKLKLNEKKQKRINDKVDEFEKFQDRVKFGEQVHEPPTL 196


>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 332

 Score = 36.3 bits (80), Expect = 0.75
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 72  RKIPAKKHRGVKDPLVQQARREQRL 146
           RKIP +KH GV+DPL Q  ++E++L
Sbjct: 5   RKIPVRKHHGVRDPLKQLEQKEKKL 29


>UniRef50_Q7X2C6 Cluster: 4-vinyl protochlorophyllide reductase;
           n=1; Rubrivivax gelatinosus|Rep: 4-vinyl
           protochlorophyllide reductase - Rhodocyclus gelatinosus
           (Rhodopseudomonas gelatinosa)
          Length = 182

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +3

Query: 564 ARSARWCTSTCRSASSPTRRPRCAATGGSAPHPMRAGARC 683
           A S  WCT+T R A SP R       G  +P    A ARC
Sbjct: 117 ASSRCWCTATRRCAKSPARPAATPPAGSRSPGRRSASARC 156


>UniRef50_Q1NQB4 Cluster: (1,4)-alpha-D-glucan
           1-alpha-D-glucosylmutase; n=3; delta proteobacterium
           MLMS-1|Rep: (1,4)-alpha-D-glucan
           1-alpha-D-glucosylmutase - delta proteobacterium MLMS-1
          Length = 976

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +1

Query: 238 MQE*KQKFSWTQPHNMYEEVTRREWTGLLTEDQQC---IESFTQP 363
           M+E KQ+ SWT+P   YEE   +++ G L  D Q    +E+F QP
Sbjct: 752 MREAKQRTSWTRPDTAYEEAV-QDFAGKLLADAQFRAELETFLQP 795


>UniRef50_Q3JIV0 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 584

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 558 RRARSARWCTSTCRSASSPTRRPRCAATGGSAPHPMRAGARCC 686
           RR  ++R C S+  +    + RPRCA +   +P   RA   CC
Sbjct: 535 RRIPASRTCCSSSSAGRRASSRPRCAISRKRSPKRTRAARTCC 577


>UniRef50_Q4N220 Cluster: Diaphanous protein, putative; n=2;
            Theileria|Rep: Diaphanous protein, putative - Theileria
            parva
          Length = 1616

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 476  QEDSEPQLNRNQRLAQKKKEXKMKALDAASEKC-EVVYEHVPFGELAHAPPALRRHGRLG 652
            QE  E ++ +   LAQKKKE ++K  +AA++K      +  P G     PP L+  G L 
Sbjct: 1096 QEQIEKEM-KELELAQKKKEEELKKKEAAAKKAPPPAGKKAPPGPGKKGPPLLKGKGPLP 1154

Query: 653  P 655
            P
Sbjct: 1155 P 1155


>UniRef50_Q7EY54 Cluster: Putative uncharacterized protein
           OSJNBb0062P14.127; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0062P14.127 - Oryza sativa subsp. japonica (Rice)
          Length = 169

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +3

Query: 579 WCTSTCRSASSPTRRPRCAATGGSA----PHPMRAGARCC*SG 695
           W TS CR  S    R   AA G +A    P P  A  RCC +G
Sbjct: 94  WSTSGCRGVSGGGTRSPAAAAGENAVATHPTPATASRRCCRAG 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,351,228
Number of Sequences: 1657284
Number of extensions: 9554522
Number of successful extensions: 32035
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32008
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)