Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b04
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    30   0.063
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    30   0.063
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   1.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.1  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    24   5.4  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    24   5.4  
AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like pepti...    23   9.5  
AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding pr...    23   9.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.5  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 30.3 bits (65), Expect = 0.063
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 546 KH*MRRARSARWCTSTCRSASSPTRR-PRCAATGGSAPHPMRAG 674
           KH M+R  S R    +  +   P+RR  R  ATG   PHP RAG
Sbjct: 96  KHDMKRGISQR----SSDAGGEPSRRWTRSGATGRRQPHPYRAG 135


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 30.3 bits (65), Expect = 0.063
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 546 KH*MRRARSARWCTSTCRSASSPTRR-PRCAATGGSAPHPMRAG 674
           KH M+R  S R    +  +   P+RR  R  ATG   PHP RAG
Sbjct: 96  KHDMKRGISQR----SSDAGGEPSRRWTRSGATGRRQPHPYRAG 135


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 218 SQETRSKCR--SRNKSSVGRNPITCMKKLP 301
           +Q + +KC   SRN S++G N +   K LP
Sbjct: 55  AQSSHTKCIPISRNASAIGENGVALKKGLP 84


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 639 WRRSAGGAWASSPNGTCS 586
           +R S+GGA A   NGTC+
Sbjct: 759 YRPSSGGAVALQSNGTCA 776


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 618 AWASSPNGTCSYT 580
           +WA +PNG C +T
Sbjct: 123 SWAHAPNGPCRHT 135


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 618 AWASSPNGTCSYT 580
           +WA +PNG C +T
Sbjct: 123 SWAHAPNGPCRHT 135


>AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like peptide
           2 precursor protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 660 GAGPSLPWRRSAGGAWASSPNGTCSY 583
           GAG     RRS+GG +      +CSY
Sbjct: 101 GAGVHRRSRRSSGGIYDECCKKSCSY 126


>AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP8 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 445 PAFPLCRHPLPFCIF 401
           PA+P+ R+  PF IF
Sbjct: 33  PAYPVLRNSTPFSIF 47


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 332 SSVRSPV--HSLLVTSSYMLWGCVQLNFCFYSCIL 234
           SS+ S +  H +  TS+ ++W  V    C Y C +
Sbjct: 13  SSITSDLEEHEIFPTSNAIIWTTVTHILCAYLCYI 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,179
Number of Sequences: 2352
Number of extensions: 10620
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)