Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9b04
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051866-1|AAK93290.1|  332|Drosophila melanogaster LD36157p pro...    36   0.041
AE014298-2587|AAF48743.1|  332|Drosophila melanogaster CG8326-PA...    36   0.041
AY058734-1|AAL13963.1|  712|Drosophila melanogaster LP01469p pro...    31   1.2  
AE014297-2288|AAF55374.2|  712|Drosophila melanogaster CG8907-PA...    31   1.2  

>AY051866-1|AAK93290.1|  332|Drosophila melanogaster LD36157p
           protein.
          Length = 332

 Score = 36.3 bits (80), Expect = 0.041
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 72  RKIPAKKHRGVKDPLVQQARREQRL 146
           RKIP +KH GV+DPL Q  ++E++L
Sbjct: 5   RKIPVRKHHGVRDPLKQLEQKEKKL 29


>AE014298-2587|AAF48743.1|  332|Drosophila melanogaster CG8326-PA
           protein.
          Length = 332

 Score = 36.3 bits (80), Expect = 0.041
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 72  RKIPAKKHRGVKDPLVQQARREQRL 146
           RKIP +KH GV+DPL Q  ++E++L
Sbjct: 5   RKIPVRKHHGVRDPLKQLEQKEKKL 29


>AY058734-1|AAL13963.1|  712|Drosophila melanogaster LP01469p
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 82  LPKNIEE*KIP*CNRPGGNKGYYK-MYILT*NY*KTVKLENETRKIKSRDSIKMQE*KQK 258
           +P+N  E  +P  N+  G+    K  Y L   +  T KL+NE    + ++ +K+    +K
Sbjct: 1   MPQNGYENGVPGGNQANGHYDEVKPTYAL--EHLATFKLKNEAEVKQPKEKMKLLVELEK 58

Query: 259 FSWTQPHNMYEEVTRREWTGLLTEDQQCIESF 354
                PH M+      +W  +L  D + IE+F
Sbjct: 59  TGGIWPHKMFMSF-NGQWLVMLDSDMKEIENF 89


>AE014297-2288|AAF55374.2|  712|Drosophila melanogaster CG8907-PA
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 82  LPKNIEE*KIP*CNRPGGNKGYYK-MYILT*NY*KTVKLENETRKIKSRDSIKMQE*KQK 258
           +P+N  E  +P  N+  G+    K  Y L   +  T KL+NE    + ++ +K+    +K
Sbjct: 1   MPQNGYENGVPGGNQANGHYDEVKPTYAL--EHLATFKLKNEAEVKQPKEKMKLLVELEK 58

Query: 259 FSWTQPHNMYEEVTRREWTGLLTEDQQCIESF 354
                PH M+      +W  +L  D + IE+F
Sbjct: 59  TGGIWPHKMFMSF-NGQWLVMLDSDMKEIENF 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,280,885
Number of Sequences: 53049
Number of extensions: 462366
Number of successful extensions: 1513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)