Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9a18
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    31   0.010
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    27   0.16 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.16 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
 Frame = -1

Query: 528 KYKTINVVRRVGSGAHASVALQHYIGVRFSENETAGGAKIDRLNALVGLFVISNYAPNYF 349
           KYKT   +    S        Q Y G++    +  G  KI  L  L+   + ++   +  
Sbjct: 223 KYKTSGSLYTCWSEFTQKTQGQIY-GIKVDIRDAYGNVKIPVLCKLIQS-IPTHLLDSEK 280

Query: 348 KHFAIVIVNFQFFNFRRVLQTYRENVLVKKPLSG*IAEVDQ-IDRRIYF 205
           K+F +  ++ QF  FRR +  +   +L   PLSG + E+      R+YF
Sbjct: 281 KNFIVDHISNQFVAFRRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYF 329


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -1

Query: 393 LVGLFVISNYAPNYFKHFAIVIVNFQFFNFRRVLQTYRENVLVKKPLSG*IAEVDQI-DR 217
           ++GL     +A  YF+ + +  VNF FF   ++L     N  + K L   +   +++ +R
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRN--LTKQLRFKLRFFEKLGNR 196

Query: 216 RIYFVRGLWNVVI*IAFL 163
           R+ FV+ L  +   I  L
Sbjct: 197 RLGFVQRLDQIQFDICLL 214


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -1

Query: 393 LVGLFVISNYAPNYFKHFAIVIVNFQFFNFRRVLQTYRENVLVKKPLSG*IAEVDQI-DR 217
           ++GL     +A  YF+ + +  VNF FF   ++L     N  + K L   +   +++ +R
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRN--LTKQLRFKLRFFEKLGNR 196

Query: 216 RIYFVRGLWNVVI*IAFL 163
           R+ FV+ L  +   I  L
Sbjct: 197 RLGFVQRLDQIQFDICLL 214


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 701 VFLHNLQ*LLIVGLEGNVIAPPSNTSV 621
           +  H+L  L  + LEGN I   SNTS+
Sbjct: 507 IVTHSLTELRHLSLEGNPITTLSNTSL 533


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 548 WPLCKTTDFRVSKEPCLPLLKSKNLP 625
           WPL  T +  +     LP+ +S+N P
Sbjct: 528 WPLLSTINRHLRGNELLPMQQSQNPP 553


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 378 VISNYAPNYFKHFAIVIVNFQFFNFRRVLQTYRENV 271
           V++   P++ + F+ V++  QFF    +    R+NV
Sbjct: 21  VLAYPQPSFHQTFSFVVIFGQFFGIMPLHGVSRKNV 56


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 739 WYNITRDFYNTV*FFYTICN 680
           ++N ++    ++ FFY ICN
Sbjct: 3   YFNYSKKDIRSLSFFYKICN 22


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 739 WYNITRDFYNTV*FFYTICN 680
           ++N ++    ++ FFY ICN
Sbjct: 3   YFNYSKKDIRSLSFFYKICN 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,439
Number of Sequences: 336
Number of extensions: 3965
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)