Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9a18
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 33 0.16
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 33 0.16
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 28 8.0
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 28 8.0
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 28 8.0
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 208 IYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNC-KVF--EIIRRIIRNH 378
IYP N ++L +FF QY+ P L +++ +D +N +VF EI+ +++
Sbjct: 566 IYPLFNFLNLFPFGSPQFFSQYVHPQYLNFALSLRDEALDKNNLPRVFLLEILSKMMSRK 625
Query: 379 KEPNERIQ 402
+ ++ +Q
Sbjct: 626 TKQDKSVQ 633
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 208 IYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNC-KVF--EIIRRIIRNH 378
IYP N ++L +FF QY+ P L +++ +D +N +VF EI+ +++
Sbjct: 566 IYPLFNFLNLFPFGSPQFFSQYVHPQYLNFALSLRDEALDKNNLPRVFLLEILSKMMSRK 625
Query: 379 KEPNERIQ 402
+ ++ +Q
Sbjct: 626 TKQDKSVQ 633
>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
protein F02C9.3 protein.
Length = 1064
Score = 31.1 bits (67), Expect = 0.86
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = +1
Query: 241 YLARERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEIIRRIIRNHKEPNE--RIQTIDL 414
YLAR + YI P+SL ++ +L I ++R+ P E RI +
Sbjct: 372 YLARFILLFSYIIPISLRTNVDMAKLFYSWQIGHDHHIPETVVRSSTIPEELGRISFLLS 431
Query: 415 STTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFSG-IKGT 591
TG L E + + ++ DA ++V + S +AL + FS +K
Sbjct: 432 DKTGTLTKNEMHFKKI--HLGTVAFSGDALEEVEQHV---KSAYDSALVKHPFSAKLKNA 486
Query: 592 VFATVKVKKFTEVLDGGAITF 654
V + T VL+ G +++
Sbjct: 487 VESLALCHNVTPVLENGELSY 507
>Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical
protein F28F8.8 protein.
Length = 313
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 SINLVDLSYLARERFFYQYIFPVSLEH--TTEVKELKIDDHNCKVFEIIRRIIR-NHKEP 387
S+ VD+ L F ++ I P+ L++ + +++LKIDDH C F+ I +++ NH +
Sbjct: 148 SVKKVDVGKLTITGFIHEEI-PMILQYFGSDNIQDLKIDDHIC--FDHIGKVVESNHWKK 204
Query: 388 NERIQTI 408
+ I I
Sbjct: 205 AKSIHFI 211
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 44 IRDAPLAIIDSKTTRAHGFCMLWFTSKSRWTILTA*TYAVKNAIYI 181
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 44 IRDAPLAIIDSKTTRAHGFCMLWFTSKSRWTILTA*TYAVKNAIYI 181
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 543 FAWLLKYKTINVVRRVGSGAHASVALQHYIGVRFSENETAGGA 415
F W K+ IN++++VG GA+ V + G N+T GA
Sbjct: 123 FFWEFKHSQINLIKKVGKGAYGEV----FKGTVTRGNKTFNGA 161
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 283 VSLEHTTEVKELKIDDHNCKVFEIIRRIIRNH 378
+ HTTE KI+DHN VF + + ++H
Sbjct: 67 IKAPHTTESSMKKIEDHNTLVFIVDEKANKHH 98
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 484 CTRPDAADDVNCFILQEPSEM--MAALQDNRFSGIKG 588
CTRP+ + VN F + EPS++ M A N S I+G
Sbjct: 1947 CTRPEYSIMVNKFEILEPSKLLTMVANATNTESSIRG 1983
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 484 CTRPDAADDVNCFILQEPSEM--MAALQDNRFSGIKG 588
CTRP+ + VN F + EPS++ M A N S I+G
Sbjct: 1947 CTRPEYSIMVNKFEILEPSKLLTMVANATNTESSIRG 1983
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 484 CTRPDAADDVNCFILQEPSEM--MAALQDNRFSGIKG 588
CTRP+ + VN F + EPS++ M A N S I+G
Sbjct: 1966 CTRPEYSIMVNKFEILEPSKLLTMVANATNTESSIRG 2002
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 100 LYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLV 231
L+ VH + L D DI YL+H +P+ + + P ++L+
Sbjct: 22 LWNTVHGAQLLPDLGTDDIGKNNEYLFHRIPRATDNLIPIVSLI 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,224,306
Number of Sequences: 27780
Number of extensions: 378544
Number of successful extensions: 1087
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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