Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9a16
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.2  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.2  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   5.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.9  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = -2

Query: 380 CLVFYRVKLHVQRVRHVFQVNIVYRAVHNFNKSRLV 273
           CL  +  K+H + ++ +  +N V   ++N    R +
Sbjct: 333 CLCLFGAKVHDESIKPLLTLNSVPTEIYNLEIQRFI 368


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 555 KEKNLMLKNVIDTILNFINDKIKMLNG 635
           K    +L N++  I+ F    IK LNG
Sbjct: 117 KHNLFLLDNIVKPIIAFYYKPIKTLNG 143


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -3

Query: 133 IFIFQELKLFSLRTLKPFIVVNRVY*KQK 47
           +F+F  + + +L +    ++VN V+ K+K
Sbjct: 75  VFLFDIITIVTLTSTSILLIVNAVFVKEK 103


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 585 IDTILNFINDKIKMLNGDYVHDRGLIRGAIVFCI 686
           +  I   IN+++K+ +GDY    G   G   F +
Sbjct: 62  VPIITRVINEEVKLASGDYTLPVGTTVGIGQFLV 95


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 198 DEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVY 302
           D+V  NSL+S Y   +         Y   F+K ++
Sbjct: 105 DDVDLNSLYSSYEITRFIRSRETDVYTHNFVKDIF 139


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 359 KLHVQRVRHVFQVNIVYRAVHNFNK 285
           ++++QR++ V+Q    YR V N  K
Sbjct: 491 RVNIQRMKQVYQQLSNYRNVDNSAK 515


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 426 RSVTKETLQLTINFYTNMMNLPEYKIPRMVM 518
           R  T+E +   IN  T    LPE    R +M
Sbjct: 37  RQWTREHVAQWINLVTQQHGLPEVPSSRFLM 67


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 426 RSVTKETLQLTINFYTNMMNLPEYKIPRMVM 518
           R  T+E +   IN  T    LPE    R +M
Sbjct: 37  RQWTREHVAQWINLVTQQHGLPEVPSSRFLM 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,157
Number of Sequences: 336
Number of extensions: 3781
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)