Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9a06
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    28   0.062
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   3.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   3.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.4  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 209 GTTGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMT 340
           G   + + TL V F   +WY+ S++++ VG  A T +  P T +
Sbjct: 235 GGASASKVTLSVPFYGHSWYLQSTSNHDVGAPATTGIAGPFTQS 278


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 356 HTAVPLS*LVEMVALLMPVCP--RHYWLNLTYTTLRTG 249
           H  + LS  ++ VA    V    RHY++N+T+  L  G
Sbjct: 475 HLLMELSRAIDSVACSKTVSDGIRHYYVNVTFPHLFNG 512


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 434 GSNSSSAIASNVLHTG 387
           GSN+SS ++ N L+TG
Sbjct: 241 GSNTSSMLSLNCLNTG 256


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 434 GSNSSSAIASNVLHTG 387
           GSN+SS ++ N L+TG
Sbjct: 30  GSNTSSMLSLNCLNTG 45


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 434 GSNSSSAIASNVLHTG 387
           GSN+SS ++ N L+TG
Sbjct: 30  GSNTSSMLSLNCLNTG 45


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 476 LCSQVSIWKVPVSYAHTGIEFSSCHK 553
           LCS+ +IW  PV    T  E S   K
Sbjct: 71  LCSEPAIWPKPVHIKLTNRESSIIDK 96


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 43  YNII*ASLITKNVYVTQN 96
           YNI+  SL    VY+T N
Sbjct: 47  YNIVAVSLTAYMVYITTN 64


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 532 NSCVGIGDWHFPN 494
           N C G  DW  PN
Sbjct: 218 NQCSGTIDWALPN 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,021
Number of Sequences: 336
Number of extensions: 4082
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)