Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9a06
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.7  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.9  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   3.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   3.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   6.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.0  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   9.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.0  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 606 QITTLWHHFHS 574
           ++T  WHHFHS
Sbjct: 535 EVTNRWHHFHS 545


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 606 QITTLWHHFHS 574
           ++T  WHHFHS
Sbjct: 511 EVTNRWHHFHS 521


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 194 KKSAMGTTGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLT 334
           K  ++G +GSR+   +V     +WY+   + + V  L + + P   T
Sbjct: 636 KNVSIGRSGSRKLIEVVPDTTTSWYLTGFSIDPVYGLGIIKKPIQFT 682


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 292 RGQTGINRATISTNYDSGTAVCSGLAECTRASPVWSTFDAMADELL 429
           RG   +  + ++  Y    AVCS   E       W    A ADELL
Sbjct: 434 RGNIHLVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEVAAAADELL 479


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 292 RGQTGINRATISTNYDSGTAVCSGLAECTRASPVWSTFDAMADELL 429
           RG   +  + ++  Y    AVCS   E       W    A ADELL
Sbjct: 465 RGNIHLVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEVAAAADELL 510


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -2

Query: 631 PTSFFRLNS--NYHFVAPFSFSRRHK*EFVARTELNSCVGIGDWHF 500
           P+S FR +   N    AP S S R+        +LNS +   DW F
Sbjct: 253 PSSLFRASRVRNELPSAPNSLSVRYNFRLTDYRKLNSILSRADWSF 298


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 672 IPYSTTLFIRFGSSRLLSFA*TQITTLWHHFHS 574
           +P+ T   I FG++   +F  T+  T ++H HS
Sbjct: 155 VPFITQCPIGFGNTFRYAFLATEPGTQFYHSHS 187


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 447 PWRSPNFLPHC 479
           P ++PN LPHC
Sbjct: 953 PVKAPNVLPHC 963


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 447 PWRSPNFLPHCARKFPFGKCQSPMP 521
           P+R P F     ++FP  K QS +P
Sbjct: 9   PFRCPLFFSKHPKQFPPSKKQSELP 33


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 495 METCEHSVVRSLAIAKGTKTRVQ 427
           ++ C+H ++R    AKGT   +Q
Sbjct: 63  VDDCQHPLIRDCKTAKGTWDALQ 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,560
Number of Sequences: 2352
Number of extensions: 16968
Number of successful extensions: 88
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)