Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9a05
(258 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7R934 Cluster: Putative uncharacterized protein PY0703... 36 0.18
UniRef50_Q2HS59 Cluster: RNA-binding region RNP-1; n=2; Medicago... 36 0.24
UniRef50_O01820 Cluster: Him-three paralog protein 3; n=1; Caeno... 32 2.2
UniRef50_Q058C0 Cluster: Type III protein export, membrane compo... 32 2.9
UniRef50_Q2UGQ8 Cluster: Protein required for normal rRNA proces... 31 3.8
UniRef50_UPI0000ECA5F3 Cluster: UPI0000ECA5F3 related cluster; n... 31 6.7
UniRef50_A5Z7K5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY0192... 31 6.7
UniRef50_Q4YDG4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
>UniRef50_Q7R934 Cluster: Putative uncharacterized protein PY07033;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY07033 - Plasmodium yoelii yoelii
Length = 1061
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +1
Query: 142 NSYLFKLILMNINLNYRAKFVVKTYVYFINKY 237
NSY+ +++ ++ N+ Y+ F++ +VY+INKY
Sbjct: 35 NSYISQILYISKNIYYKNSFLIYLFVYYINKY 66
>UniRef50_Q2HS59 Cluster: RNA-binding region RNP-1; n=2; Medicago
truncatula|Rep: RNA-binding region RNP-1 - Medicago
truncatula (Barrel medic)
Length = 742
Score = 35.5 bits (78), Expect = 0.24
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 13 ISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVDY 120
++K+SEP +KTV ++K D +E N P E ++Y
Sbjct: 246 VAKKSEPEPEKTVESDEKIDLEEENDPEEEMEEIEY 281
>UniRef50_O01820 Cluster: Him-three paralog protein 3; n=1;
Caenorhabditis elegans|Rep: Him-three paralog protein 3
- Caenorhabditis elegans
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 1 SEASISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVDYGL*KKKIN 144
S+A I+ + + K+ +PE+ D D + + E ST YG+ IN
Sbjct: 450 SDAIITSPEKRNESKSAIPEEAADLDNTTSEKQESSTARYGVSNTSIN 497
>UniRef50_Q058C0 Cluster: Type III protein export, membrane
component; n=1; Buchnera aphidicola str. Cc (Cinara
cedri)|Rep: Type III protein export, membrane component
- Buchnera aphidicola subsp. Cinara cedri
Length = 266
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 142 NSYLFKLILMNINLNYRAKFVVKTYVYFINKY 237
N YLF ILMN+ LNY K ++K + Y KY
Sbjct: 236 NFYLFNKILMNVFLNYFKKNIIKKF-YISLKY 266
>UniRef50_Q2UGQ8 Cluster: Protein required for normal rRNA
processing; n=18; Fungi/Metazoa group|Rep: Protein
required for normal rRNA processing - Aspergillus oryzae
Length = 681
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 7 ASISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVD 117
AS+++Q E + + E++ DSDE AT+G VD
Sbjct: 492 ASLAEQEEEGEAEIAAEEEEEDSDEEMEEATDGKKVD 528
>UniRef50_UPI0000ECA5F3 Cluster: UPI0000ECA5F3 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA5F3 UniRef100 entry -
Gallus gallus
Length = 141
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 93 WCI*LITVKFVLRNNSFFFCWF*LFTYTCFR 1
W + F +NN FFFC F L ++ C+R
Sbjct: 56 WLFVFLYAHFQNQNNFFFFCSFALHSFQCYR 86
>UniRef50_A5Z7K5 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 684
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 136 KINSYLFKLILMNINLNYRAKFVVKTYVY 222
K+ S +F L+++ + +NY+ K+ K Y+Y
Sbjct: 273 KLESKVFNLLILCMKINYKKKYTNKKYIY 301
>UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY01922;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01922 - Plasmodium yoelii yoelii
Length = 1614
Score = 30.7 bits (66), Expect = 6.7
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Frame = +1
Query: 37 KKKTVVPEDKFDSDESNAPATEGSTVDYGL*KKKINSYLFKLI--LMNINLNYRA---KF 201
K+KT ++ D E ST+ + +K + LF+LI L+N+ NY +
Sbjct: 2 KEKTTYNNEENDEKSKEGNKNE-STIFTNIDHEKFLNILFELITGLINLKTNYNTYDDNY 60
Query: 202 VVKTY-------VYFINKYSFSVKKK 258
++ Y V+F NKY+F KKK
Sbjct: 61 LIFNYFVLRWILVFFKNKYTFFSKKK 86
>UniRef50_Q4YDG4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 125
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 221 YTYVLTTNFAR*FKLIFININLNKYELIFFFYN 123
Y Y++ + F R F L++I NL + +I+FF++
Sbjct: 54 YIYIICSCFMRMFYLLYILFNLYTHFIIYFFFS 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,528,902
Number of Sequences: 1657284
Number of extensions: 2853509
Number of successful extensions: 10283
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10280
length of database: 575,637,011
effective HSP length: 63
effective length of database: 471,228,119
effective search space used: 10367018618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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