Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9a04
         (166 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   3.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   4.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 51  QKENQCQYYPNIVVVLF 1
           Q +N   +Y NI+ +LF
Sbjct: 940 QIDNWTSFYYNIIPILF 956


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 51  QKENQCQYYPNIVVVLF 1
           Q +N   +Y NI+ +LF
Sbjct: 940 QIDNWTSFYYNIIPILF 956


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 51  QKENQCQYYPNIVVVLF 1
           Q +N   +Y NI+ +LF
Sbjct: 940 QIDNWTSFYYNIIPILF 956


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 51  QKENQCQYYPNIVVVLF 1
           Q +N   +Y NI+ +LF
Sbjct: 940 QIDNWTSFYYNIIPILF 956


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 21 SDSIDTDSPFVF 56
          S ++ TD PF+F
Sbjct: 26 SKNVPTDKPFLF 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.285    0.109    0.270 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,256
Number of Sequences: 336
Number of extensions: 94
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 34
effective length of database: 111,161
effective search space used:  2223220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 18 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (17.2 bits)