Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p21
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 101 CLNMTR**EDSTRYTVHLPY 42
           CLN     + +T YT H PY
Sbjct: 70  CLNGATCQDHTTHYTCHCPY 89


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 322 IFSFYAFFHTNVSFAAFFKIG 260
           +F  +  FH  V  A  FKIG
Sbjct: 601 LFHCHIEFHVEVGMALVFKIG 621


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 382 GRFEKKQCTARRYV 423
           GR  +K C+ +RYV
Sbjct: 778 GRITQKSCSTKRYV 791


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 PNSIHGILQWRGF 189
           P S+HG L WR F
Sbjct: 296 PLSLHGQLLWREF 308


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 619 VDSFHFLAVWWFI 581
           V SF FLA+W ++
Sbjct: 3   VGSFTFLAIWLYL 15


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 563 LKDA*LHPHTWSRNCKNVS 507
           L  A +  H WS NC  +S
Sbjct: 226 LSQAWISVHIWSPNCDKLS 244


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 563 LKDA*LHPHTWSRNCKNVS 507
           L  A +  H WS NC  +S
Sbjct: 459 LSQAWISVHIWSPNCDKLS 477


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 563 LKDA*LHPHTWSRNCKNVS 507
           L  A +  H WS NC  +S
Sbjct: 459 LSQAWISVHIWSPNCDKLS 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,676
Number of Sequences: 336
Number of extensions: 4106
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)