Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p20
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    31   0.011
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.42 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.42 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.8  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   9.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 25/109 (22%), Positives = 49/109 (44%)
 Frame = +2

Query: 161 HPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIFL 340
           H   ++ ++ + +   A+C + L CD    ++ QT+   C    E  F + SH    +++
Sbjct: 271 HKLEISSLVQTAITLVAMCGLVLICDSAKSESQQTVF-LCYKLMEK-FPERSHEQQELYM 328

Query: 341 KDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAESLQVRGLTENNTLN 487
              +  E KS+ +F   G  +V ++ L   L T  +  +  +  N  LN
Sbjct: 329 A-AQVIE-KSVANFTAAGFFDVKRSTLFGILATTTTYLIVTIQFNQGLN 375


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 403 IYFPLIHKIQ*RFHLCKSYIFKEYNGMWMRILQEYAFKIW 284
           +  P + ++Q  + L  +Y+  E  G W+R +++  +K+W
Sbjct: 111 VSLPEVERVQWIWLLIFAYLIPEV-GTWIRAVRKCLYKLW 149


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 403 IYFPLIHKIQ*RFHLCKSYIFKEYNGMWMRILQEYAFKIW 284
           +  P + ++Q  + L  +Y+  E  G W+R +++  +K+W
Sbjct: 111 VSLPEVERVQWIWLLIFAYLIPEV-GTWIRAVRKCLYKLW 149


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 332 IFLKDVRFAEMKSLLDFMYKGEVNVGQNMLPMFLKTAES 448
           IFL D+   E+ ++    YK E     N + MF+K  ++
Sbjct: 263 IFLCDLIRREIANVQVLAYKIEAKRRDNEIKMFVKIVDA 301


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 548 TPRGIGSPRPPLASIALPT 492
           TP    SP PP    A PT
Sbjct: 38  TPNSAASPAPPEEEAASPT 56


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 467 TENNTLNPKSEERSTPVVGAENLSRAEFAT 556
           +  ++L P+S ++S P      +SRA+  T
Sbjct: 233 SSESSLRPRSSQKSAPGKRTPLISRAKINT 262


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 352 SYIFKEYNGMWMRILQEYA 296
           +++ K Y   W +IL +YA
Sbjct: 93  AFVQKNYPKEWNKILHQYA 111


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 161 GCSSASRIAGPLLVL 117
           GC +  R  GPLLV+
Sbjct: 518 GCVTEGRAEGPLLVV 532


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 212 LCDVTLACDGETVKAHQTILSACSPY 289
           LCD +   +G T + H T  +   PY
Sbjct: 64  LCDSSPCLNGATCQDHTTHYTCHCPY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,481
Number of Sequences: 336
Number of extensions: 3119
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)