Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p16
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z92973-6|CAI79258.1|  440|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical
           protein F59A1.13 protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -1

Query: 287 FSSRXDIFLPFFTTASHVRIVLFCKLLNIINVSVL 183
           FS+   +F PF +  S++  V+FC++L  + VSV+
Sbjct: 74  FSALGTLFFPF-SVDSNIYAVIFCRVLQGLGVSVI 107


>Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical
           protein T03F7.7b protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
 Frame = -3

Query: 282 VEXGYFFAIFYNC----VPRSNRVILQVAQHHKRVRFKRIN-----FVYHIGKMFFHRF 133
           ++  +FFA F N     V ++ + I+Q+ +H K + +++IN        +IGK  F RF
Sbjct: 33  IDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDLDIFTTVNIGKDCFERF 91


>Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical
           protein T03F7.7a protein.
          Length = 368

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
 Frame = -3

Query: 282 VEXGYFFAIFYNC----VPRSNRVILQVAQHHKRVRFKRIN-----FVYHIGKMFFHRF 133
           ++  +FFA F N     V ++ + I+Q+ +H K + +++IN        +IGK  F RF
Sbjct: 33  IDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDLDIFTTVNIGKDCFERF 91


>U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical
           protein C33F10.2 protein.
          Length = 826

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
 Frame = -1

Query: 347 VY*TLSRLLTTPFFVNSTLIFSSRXDIF-LPFFTTASHVRIVLFCKLLNI--------IN 195
           +Y T S +LT    +N++ +F     I  L         R  ++C LL+I        +N
Sbjct: 414 LYETASNMLTVDHLLNASAVFGISSIISRLTNIGVIPTQRADVWCTLLDINETKWRDYLN 473

Query: 194 VSVLRESISSTTLE----KCFSIDSYMTT 120
           + VL    S   LE    +C   DSYMTT
Sbjct: 474 LDVLASHSSDRQLEVDIPRCHQYDSYMTT 502


>Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical
           protein R186.2a protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = -1

Query: 353 SSVY*TLSRLLTTPFFVNSTLIFSSRXDIFLPFFTTASHVR----IVLFCKLLNIINVSV 186
           S +Y  ++ ++  P F+  TLIF S   +F+ FF + SH+     ++L   LL++   S+
Sbjct: 13  SKIYEVINEIVY-PIFLTITLIFHSVLLVFIIFF-SPSHLNFLKFLLLTTSLLDVFATSI 70

Query: 185 L 183
           L
Sbjct: 71  L 71


>Z92973-6|CAI79258.1|  440|Caenorhabditis elegans Hypothetical
           protein Y6G8.5 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/70 (24%), Positives = 35/70 (50%)
 Frame = -1

Query: 257 FFTTASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISXSSLFKCP 78
           FF   S+   + F K +  +NVS+L +++S + +   F ++ ++T    F+     F  P
Sbjct: 219 FFNFTSYFTTLFFFKTMPRLNVSIL-QTLSVSVM--FFLMNRHLTLIPQFLVSIKRFNFP 275

Query: 77  AYTK*PTKQM 48
            +   P+ +M
Sbjct: 276 KFNNFPSSKM 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,956,885
Number of Sequences: 27780
Number of extensions: 295015
Number of successful extensions: 781
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)