Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8p13
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0346 + 2652181-2653566 34 0.13
05_07_0219 - 28474661-28475146,28475979-28476644 33 0.17
09_06_0184 - 21413275-21414267 33 0.30
04_04_0248 - 23891684-23892064 32 0.53
07_01_0435 - 3311257-3311280,3311281-3311516,3313288-3313465 31 0.93
10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655 31 1.2
10_02_0112 + 5385660-5385821,5386337-5386876 31 1.2
04_04_0711 - 27468045-27468264,27468831-27468935,27469431-274694... 30 1.6
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 30 2.1
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 29 2.8
02_02_0085 - 6643562-6644965 29 2.8
02_01_0490 + 3541056-3542276 29 2.8
06_01_0213 + 1628974-1629339,1629441-1629590,1630935-1631095,163... 29 3.7
02_03_0279 + 17250347-17252098 29 3.7
10_01_0026 - 351737-353443 29 4.9
09_02_0229 - 6062825-6064899,6064943-6065432,6065479-6065956,606... 29 4.9
07_03_1378 + 26158233-26158562,26159075-26159176,26159551-261598... 29 4.9
12_02_0023 - 12404617-12405285 28 6.5
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 28 6.5
08_02_1138 + 24631919-24632248,24634100-24634502,24634788-246349... 28 6.5
08_02_0536 - 18302394-18302826,18302903-18303183,18303480-183037... 28 6.5
01_05_0733 - 24707753-24707819,24708906-24709723 28 6.5
10_05_0033 - 8415692-8415738,8416084-8416174,8416568-8416821,841... 28 8.6
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304... 28 8.6
04_04_0951 + 29614196-29615275 28 8.6
04_01_0599 + 7871933-7872004,7872696-7873168,7873257-7873334,787... 28 8.6
03_01_0630 + 4635297-4636220 28 8.6
>12_01_0346 + 2652181-2653566
Length = 461
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 368 DVMDEVVAIHGRGNFPTLHVRLRELVAGVRARLELAQAAGGAGVSVRD----VRLNGGAA 535
DV+DEVV + G P + ++ AG A ++ + GG V V + V GG
Sbjct: 372 DVIDEVVLVGGSTKIPRIRELIKNYFAGKEATVKATASIGGGAVVVVEPEEAVVHGGGLL 431
Query: 536 SHVLGD 553
SH + D
Sbjct: 432 SHPMED 437
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 486 AGPGSPYGMSASTA----ALPATCSATTHSLTPTSISSSLRSCPRPVTATAL--RPRCSD 647
A P SP +SA+T PAT S+ T + T T+ +S P P +AT L RPR +
Sbjct: 73 APPPSPPPLSATTPHPPPPSPATSSSRTATATATATPTSPTPTPPPTSATLLWPRPRPTK 132
Query: 648 TWPPCCLQRRLD 683
LQRR D
Sbjct: 133 EEEGEGLQRRTD 144
>09_06_0184 - 21413275-21414267
Length = 330
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 420 CTCAYASL*-LGCEPAWSWRRRLAGPGSPYGMSASTAALPATCSATTHSL-----TPTSI 581
CT + L L P+ W + PGS G + A+ ++CS T S PTS+
Sbjct: 29 CTASEVHLPPLWSSPSDRWSPHIGTPGSHIGAVQAPASSLSSCSETAVSFLPAPALPTSM 88
Query: 582 SSSLRSCPRPVTATALRPRCSDTWPP 659
S+ S P T ++ P S PP
Sbjct: 89 ESTFPSPRPPSTPSSSTPPSSPVPPP 114
>04_04_0248 - 23891684-23892064
Length = 126
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +3
Query: 369 TSWTRWWPSTVAATSLRCTCAYASL*LGCEPAWSWRRRLAGPGSPYGMSASTAALPATCS 548
T+ TR WP+ VAA +R A + A + R A S ++A+ A +
Sbjct: 10 TAATRIWPAVVAAARMRPAAATGARMQSVAAAATRFRSAAAAASRMRLAAAAATRMRPAA 69
Query: 549 ATTHSLTPTSISSSLRSCPRPVTATALRPRCSDTWP 656
A L P S +++ R P A + P + P
Sbjct: 70 AAAMPLLP-SAATAARMWPPAAKAAPMHPAAATAAP 104
>07_01_0435 - 3311257-3311280,3311281-3311516,3313288-3313465
Length = 145
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 571 GVRLWVVAEHVAGSAAVEADIPYGDPGPASRLRQLQAGS 455
GVR W E G+ +A + G+ G A R+R++++G+
Sbjct: 8 GVRRWRAEEEGWGAGECDAKLRIGERGSAMRIREMRSGA 46
>10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655
Length = 719
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 440 LVAGVRARLELAQAAGGAGVSVRDVRLNGGAASHVLGDNPQPYSDIDLIFTAE 598
L++ V L L+ G GV + VR +GG ASHV GD + D+ ++ E
Sbjct: 453 LLSVVAQELRLSVECGDDGVLLTSVR-SGGYASHVDGDGRGGFVDVGDLYADE 504
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 209 GVIKLSPDTASLISACDLLDDMKSESSYTSSEE 307
G K+SPD +L+S+ ++DDM ESSY + ++
Sbjct: 144 GEEKMSPDDVALLSS--MVDDMNMESSYENDDD 174
>04_04_0711 -
27468045-27468264,27468831-27468935,27469431-27469489,
27469566-27470009,27470123-27470187,27470871-27471066,
27471429-27471590
Length = 416
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +2
Query: 389 AIHGRGNFPTLHVRLRELVAGVRARLELAQAAGGAGVSVRDVRLNGGAASHVL 547
A G G FP + V VRA E+ A+GGAG S D + G +A VL
Sbjct: 63 AEEGGGIFPVV-VSTWPFREAVRAAWEVVSASGGAGCSAVDAVVAGCSACEVL 114
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 483 LAGPGSPYGMSASTAALPATCSATTHSLTPTSI--SSSLRSCPRPVTATALRPRCS 644
+ PGSP + S ALP S +LTPT + +S + P P A A+ P S
Sbjct: 49 VVAPGSPIMDADSWPALPGLASPPPTTLTPTPMPPKASPKVAPLPPPAEAVIPPIS 104
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 480 RLAGPGSPYGMSASTAALPATCSATTHSLTPTSISSSLRSCPR--PVTATALRPRCSD 647
R AGP P S+ST++ PA SAT T + SCP P A R R D
Sbjct: 37 RGAGPSPPPPPSSSTSSFPAAASATAAG-TGGDAPPIVGSCPDMCPARERAQRERLRD 93
>02_02_0085 - 6643562-6644965
Length = 467
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 275 KSESSYTSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHGRGNFP-TLHVRLRELVAG 451
+S ++S + G AV +YEQ R N + E VA+ + T L EL+A
Sbjct: 9 RSSGHASTSYDASAGGGAVAVSAYEQRIRRNAAVLEKVAVSVHDSLASTREAALAELIAA 68
Query: 452 VRARLELAQAAGG 490
+ L A GG
Sbjct: 69 LEGFLSADDAEGG 81
>02_01_0490 + 3541056-3542276
Length = 406
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 453 CEPAWSWRRRLAGPGSPYGMSASTAALPATCSATTHSLTPTSISSSLRS 599
C W RL +P SAST+A P+T +A T S +S SS+ RS
Sbjct: 125 CSSRWRELLRLKKVQTPTKPSASTSASPSTATAATPS--RSSNSSAARS 171
>06_01_0213 +
1628974-1629339,1629441-1629590,1630935-1631095,
1631178-1631892,1632045-1632091,1632295-1632316
Length = 486
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 92 FQIYFEANLL*RRRAQNPLGPPRVCTCSASRPDHKSVNMGVIKLSPDTA-SLISA--CDL 262
FQ+Y + N R P G P + +A P H+S++ G+ L+P A ISA +
Sbjct: 31 FQLYIKRN---RASPPPPPGSPTAASAAAVSPIHRSLSRGL--LAPRAALPAISARGASV 85
Query: 263 LDDMKSESSYTSSEEGCGAGERHAV 337
DD +S Y + C A H V
Sbjct: 86 RDD---DSLYYAGLRRCAADPYHPV 107
>02_03_0279 + 17250347-17252098
Length = 583
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 293 TSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHG-RGNFPTLHVRLRELVAGV 454
T G G+G R ++Y ++ + V++ +A+HG FP LH L L A V
Sbjct: 493 TQGASGSGSGPRDVRINYIPIKDPDVVINSRIALHGVYVTFPRLH--LANLAAAV 545
>10_01_0026 - 351737-353443
Length = 568
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 510 MSASTAALPATCSATTHSLTPTSISSSLRSCPRPVTATALRPRCSDTWPP 659
M+AS + P++ ++TT S S SSSL P P + ++ P S PP
Sbjct: 1 MAASPESSPSSANSTTPSAP--SPSSSLSKSPSPPSPSSPPPPASTNAPP 48
>09_02_0229 -
6062825-6064899,6064943-6065432,6065479-6065956,
6066333-6066382,6068917-6069172,6069358-6069503
Length = 1164
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 254 CDLLDDMKSESSYTSSEEG-CGAGERHAVLSYEQVRRLNDVMDEVV 388
C + D ++S + Y S E CG + S ++RRL+ +MDE V
Sbjct: 609 CRMHDLLRSLAQYLSRGESLCGDPRKLDAFSLSKIRRLSVLMDEEV 654
>07_03_1378 +
26158233-26158562,26159075-26159176,26159551-26159850,
26160006-26160068
Length = 264
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 25 GSTFHASCSLNKPNHALLVQR-TLSNLFRSQLALATSRAKPSRSSARLHLFGFTT 186
GS F +S L N A V TL NLF Q + ++ R S R FGF T
Sbjct: 173 GSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVT 227
>12_02_0023 - 12404617-12405285
Length = 222
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 392 IHGRGNFPTLHVRLRELVAGVRARLELAQAAGGAGVSVRDVRLNGGAASHV 544
+H N P R+ VAG A E A A A DV AA+ V
Sbjct: 115 LHASSNIPNSRSITRDRVAGAAAEEEAAAATAAAAAVEEDVTAIAAAAATV 165
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 492 PGSPYGMSASTAALPATCSATTHSLTPTSISSSLR-SCPRPVTATALRPRCSD 647
P S +A+TAA PA+ S+T+ P ++++LR CP A+ALR D
Sbjct: 5 PNSAAATAAATAAAPAS-SSTSSPSAPKRLTTTLRILCPSS-RASALRGASRD 55
>08_02_1138 +
24631919-24632248,24634100-24634502,24634788-24634982,
24635384-24635838,24636119-24636349,24636891-24637123,
24637899-24637971
Length = 639
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 182 RPDHKSVNMGVIKLSPDTASLISACDLLDDMKSESSYTSS 301
RPD V + ++ P + + LLDD+K+ SS SS
Sbjct: 507 RPDRDDVELAILDDDPYRYGINNEDMLLDDLKANSSLVSS 546
>08_02_0536 -
18302394-18302826,18302903-18303183,18303480-18303747,
18303959-18303996,18304459-18304761
Length = 440
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +2
Query: 251 ACDLLDDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLNDVMDEVVAIHGRGNFPTLHVR 430
A L D S +S E+ GER+ V + + +N + ++G G+ P L R
Sbjct: 291 AKQLTSDFTSMTS-PIEEKSVIIGERNRVATEKIQEAINHGYKRIAVLYGGGHMPDLGRR 349
Query: 431 LRELVAGVRARLELAQA 481
LRE + V A ++ A
Sbjct: 350 LREELNMVPADVQWVTA 366
>01_05_0733 - 24707753-24707819,24708906-24709723
Length = 294
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 486 AGPGSPYGMSASTAALPATCSATTHSLTPTSI---SSSLRSCPRPVTATALRPRCSDTWP 656
AG +P A+ A C+AT + T S SS+L S P VTATAL D P
Sbjct: 19 AGHVAPAAQLAARLATHHGCTATIVTYTNLSTARNSSALASLPTGVTATALPEVSLDDLP 78
>10_05_0033 -
8415692-8415738,8416084-8416174,8416568-8416821,
8417473-8417482
Length = 133
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 493 GPASRLRQLQAGSHPSYKLA*AHVQRREVAATVDGHHLVHDVIEPPHLLVAEH 335
GPA++ R L G+ P + +Q A H +HD +PP + EH
Sbjct: 22 GPAAQPR-LMGGTAPGFVNEYFEIQSMIFKAEKPNHRDLHDRPQPPQISYGEH 73
>09_04_0609 -
18929600-18929646,18929753-18929924,18930304-18930498,
18930691-18930801,18930885-18931097,18931643-18931720,
18931894-18932001,18932175-18932316,18932413-18933761,
18934492-18935121
Length = 1014
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 323 ERHAVLSYEQVRRLNDVMDEVVAIHGRGNF--PTLHVRLRELVAGVRARLELAQAAG 487
+R+ V ++ R+ V E+ GR F P H + EL++ R+ELA G
Sbjct: 598 KRNDVKGFQPPRKNMPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKG 654
>04_04_0951 + 29614196-29615275
Length = 359
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +3
Query: 504 YGMSASTAALPATCSATTHSLTPTSISSSLRSCPRPVTATALRPRCSDTW----PPCCLQ 671
+ M++S AALP + L+P ++ + LR P A C D W P C L
Sbjct: 112 FTMASSLAALPKSSPDCAVCLSPFTLDAELRLL--PACRHAFHAACVDAWLRTTPSCPLC 169
Query: 672 RRLDVAQH 695
R H
Sbjct: 170 RATVTLPH 177
>04_01_0599 +
7871933-7872004,7872696-7873168,7873257-7873334,
7873446-7873665
Length = 280
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 AVRESVTPCSATSKCGGSMTSWTRWW-PSTVAATSLRCTCA-YASL*LGCEPAWSWRRRL 485
A + +TP S+ KC S+ W+ P TS T + Y L L P W R +
Sbjct: 30 ACYDKLTPVSSPPKCDDSVDPDAAWYVPMRSCLTSPSSTSSRYKKLALDATPKWPQRLAV 89
Query: 486 A 488
A
Sbjct: 90 A 90
>03_01_0630 + 4635297-4636220
Length = 307
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 266 DDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLNDVMD 379
+DM + S CG GE+ L+ EQVR L D
Sbjct: 22 EDMAGGHAAQSPSPSCGLGEKKRRLALEQVRALERSFD 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,045,003
Number of Sequences: 37544
Number of extensions: 420970
Number of successful extensions: 1858
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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