Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p13
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 364 EPPHLLVAEHGVTLSRTAPFF*RCIAR--FALHVIEQVAG 251
           +PP  LV +  V +S  AP     IAR  ++L  ++ V G
Sbjct: 275 QPPEFLVTQPVVRISEDAPIGTEVIARMIYSLSTVKAVDG 314


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/58 (27%), Positives = 22/58 (37%)
 Frame = +2

Query: 446  AGVRARLELAQAAGGAGVSVRDVRLNGGAASHVLGDNPQPYSDIDLIFTAELPTARHC 619
            AG   R     A GG+         +GG +S    D+   YS + +  T   PT   C
Sbjct: 844  AGGPLRGSSGGAGGGSSGGGGSGGTSGGGSSTTRRDHNIDYSSLFIQLTGTFPTLYSC 901


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 492 PGSPYGMSASTAALPATCSATTHSLTPTSIS 584
           PGS  G  +   +L A  +A +HS+  T  S
Sbjct: 623 PGSALGHPSIPTSLAAAAAAYSHSIASTMSS 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,929
Number of Sequences: 2352
Number of extensions: 12994
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)