Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8p06
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 38 0.27
UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like p... 37 0.48
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 36 0.83
UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle pr... 36 1.1
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 34 3.4
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_P31822 Cluster: Pol polyprotein [Contains: Protease (EC... 34 3.4
UniRef50_Q23UF4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:... 34 4.4
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 33 5.9
UniRef50_A7ELY2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease (Re... 33 5.9
UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2; Filobasi... 33 7.8
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 37.9 bits (84), Expect = 0.27
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADRATIGNLDIDHSALLKVPFTDFHAEFSVSLKQLW 151
+TF WVPSH GI NE ADR L+ S ++P++D + + + W
Sbjct: 1054 VTFIWVPSHVGIEGNEAADREAKRALNHAVSG-TQIPYSDLRQSIASATYREW 1105
>UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 727
Score = 37.1 bits (82), Expect = 0.48
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADRATIGNLDIDHSALLKVPFTDFHAEFSVSLK 160
I + W+P+H GI NE AD+ +++ + + +P+ DF+ + K
Sbjct: 476 IKYYWIPAHVGILGNEMADQLAKEAAELNDESPVTIPYADFYGLHKMECK 525
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 963
Score = 36.3 bits (80), Expect = 0.83
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -2
Query: 330 IVRKEILITFKWVPSHSGITSNEEADRATIGNLDIDHSALLKVPFTDFHAEFSVSLKQLW 151
I++ I W+PSH I+ NE ADR G L + LK + + W
Sbjct: 859 IMKSGFNIQLVWIPSHKNISGNEIADREAKGALKLPLQIELKSHWYQIFNSSILESNNAW 918
Query: 150 -LEYRYK-KDAAHRTSLCQHHT-KLSGADNFD 64
E+ YK + A + C + T K++ NF+
Sbjct: 919 HSEHSYKIEKKATPMNACLNQTIKIANQRNFE 950
>UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle
protein LCP65Ac; n=3; Nasonia vitripennis|Rep:
PREDICTED: similar to cuticle protein LCP65Ac - Nasonia
vitripennis
Length = 256
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADRATIGNLDIDHSALLKVPFTDFHAEFSVSLK 160
I + W+P H GI NE AD+ +++ + + +P+ DF+ + K
Sbjct: 61 IKYYWIPVHVGILGNEMADQLAKEAAELNDESHVTIPYADFYGLHKMECK 110
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 34.3 bits (75), Expect = 3.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 303 FKWVPSHSGITSNEEADRATIGNLDIDHSALLKVPFTDFHA 181
F W+P+H GI NE AD + + S +VP++D A
Sbjct: 568 FYWIPAHVGIEGNERADTVAKRATEKNFSNYSRVPYSDILA 608
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 318 EILITFKWVPSHSGITSNEEADR 250
EI I+ WVP+H GI NE ADR
Sbjct: 258 EIAISLHWVPAHQGIKGNELADR 280
>UniRef50_P31822 Cluster: Pol polyprotein [Contains: Protease (EC
3.4.23.-) (Retropepsin); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Deoxyuridine 5'-triphosphate nucleotidohydrolase
(EC 3.6.1.23) (dUTPase); Integrase (IN)]; n=264; Feline
immunodeficiency virus|Rep: Pol polyprotein [Contains:
Protease (EC 3.4.23.-) (Retropepsin); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Deoxyuridine 5'-triphosphate nucleotidohydrolase
(EC 3.6.1.23) (dUTPase); Integrase (IN)] - Feline
immunodeficiency virus (isolate TM2) (FIV)
Length = 1124
Score = 34.3 bits (75), Expect = 3.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 327 VRKEILITFKWVPSHSGITSNEEADRATIGNLDIDHSALLK 205
+ K+I I WVP H GI NEE D+ + I+ +L+
Sbjct: 679 MEKKIAIFIDWVPGHKGIPGNEEVDKLCQTMMIIEGEGILE 719
>UniRef50_Q23UF4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2573
Score = 33.9 bits (74), Expect = 4.4
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 242 MVARSASSLLVI-PECEGTHLNVINI-SLRTI*IDSLMSYTI*YK*NLLELFSKLLSVGT 415
++ +S S+ +V+ P LN++ I + T ++ +M Y+ NL E++
Sbjct: 258 VIQQSNSTCIVVQPFLAVQQLNLLQIQTTSTKNLNLIMGL---YQNNLFEIYESENQKVV 314
Query: 416 HGISQN*QVICV*QLKMQQNLKTSITFSCKDTAVTLYLITFS 541
H I N IC+ +Q N +S+TF K+ + +YL+ F+
Sbjct: 315 HSIQLN--DICIDFYLIQTNQTSSLTFVLKNNVIDIYLVAFN 354
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 33.9 bits (74), Expect = 4.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADR 250
+ F+W+P+H G+ NE+ADR
Sbjct: 286 VHFRWIPAHRGVEGNEQADR 305
>UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 1913
Score = 33.9 bits (74), Expect = 4.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADR 250
+ F W+P+H G+ NEEADR
Sbjct: 1718 VQFHWIPAHVGVPGNEEADR 1737
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 33.5 bits (73), Expect = 5.9
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADRA 247
IT WVPSH GI NE AD+A
Sbjct: 1058 ITLLWVPSHQGIHGNELADKA 1078
>UniRef50_A7ELY2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 118
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 318 EILITFKWVPSHSGITSNEEADRA 247
E+ I +W+P+H G+ NE ADRA
Sbjct: 77 ELEIELRWIPAHIGLCGNEAADRA 100
>UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]; n=28; Equine infectious anemia
virus|Rep: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] - Equine infectious anemia virus
(isolate CL22) (EIAV)
Length = 1146
Score = 33.5 bits (73), Expect = 5.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 327 VRKEILITFKWVPSHSGITSNEEADRA 247
+R++ ++ F WVP H GI N+ AD A
Sbjct: 708 IREKEIVYFAWVPGHKGICGNQLADEA 734
>UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2;
Filobasidiella neoformans|Rep: Ribonuclease H, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 321
Score = 33.1 bits (72), Expect = 7.8
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 309 ITFKWVPSHSGITSNEEADR 250
+ FK+VP+HSG+ NE ADR
Sbjct: 243 VKFKYVPAHSGVEGNEAADR 262
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,597,608
Number of Sequences: 1657284
Number of extensions: 13072406
Number of successful extensions: 29518
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29514
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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