Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p06
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -2

Query: 234 LDIDHSALLKVPFTDFHAEFSVSLKQLWLEYRYKKDAAHRTSLCQ 100
           LD+ H+ L K+P T      + +L +L L +      +H   L +
Sbjct: 348 LDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLAR 392


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 90  KLSGADNFDCSRYFSQLALFLCI 22
           KL G   F  S +FS ++ FLC+
Sbjct: 60  KLLGIIQFPISAHFSFMSRFLCL 82


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 90 KLSGADNFDCSRYFSQLALFLCI 22
          KL G   F  S +FS ++ FLC+
Sbjct: 16 KLLGIIQFPISAHFSFMSRFLCL 38


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 635 CNSSIGESVFEYKLVCHY**LHMVYNI*AISLKTYM 742
           C  SI E +   +    Y      YNI A+SL  YM
Sbjct: 23  CPRSIDEKIKRQERHSFYKIYKYTYNIVAVSLTAYM 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,976
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)