Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p02
         (421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   180   1e-47
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   4.5  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    23   6.0  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          22   7.9  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          22   7.9  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          22   7.9  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          22   7.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   7.9  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  180 bits (439), Expect = 1e-47
 Identities = 80/108 (74%), Positives = 92/108 (85%)
 Frame = +1

Query: 70  MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 249
           MGV +  I+ GD++T+PK GQT VVHYTGTL +G  FDSSR RGKPFKF +GK EVIRGW
Sbjct: 1   MGVQIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGW 60

Query: 250 DEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 393
           DEGVA+MSVG+RAKL CSPDYAYG +GHPGVIPPN+ L FDVELLR+E
Sbjct: 61  DEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = -2

Query: 108 LVSWTDSFNSNTHY---LQCISLFFR 40
           LV  T S N NTHY   L+C+  + R
Sbjct: 21  LVLTTTSANENTHYLPPLECVDPYGR 46


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 410 VTNCIYSRRRSSTSKISVELGGMTPGW 330
           V  C+++      ++I+ ELG + P W
Sbjct: 43  VLTCMHTLLAREHNRIATELGKINPHW 69


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 54 KYIVNNGCY 80
          +++VNNGCY
Sbjct: 7  RFLVNNGCY 15


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 54 KYIVNNGCY 80
          +++VNNGCY
Sbjct: 7  RFLVNNGCY 15


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 54 KYIVNNGCY 80
          +++VNNGCY
Sbjct: 7  RFLVNNGCY 15


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 54 KYIVNNGCY 80
          +++VNNGCY
Sbjct: 7  RFLVNNGCY 15


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 220  IGK-SEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVE 378
            IGK +  IR     +  + +  + +  C  D   G   +P     + TLIFD+E
Sbjct: 1167 IGKVASYIREKTTNLQTIVISLKEEFYCHADVLIGICPYPAECLVSQTLIFDLE 1220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,521
Number of Sequences: 2352
Number of extensions: 8588
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)