Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8p02
         (421 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.80 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.3  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   4.3  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    20   9.9  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   9.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   9.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    20   9.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 277  GERAKLTCSPDYAYGQQGHPGVIPPNST 360
            GER  L  S DY Y  +G  G    +ST
Sbjct: 1579 GERVMLKASEDYRYSVRGLCGNFDHDST 1606


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 214 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 306
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -3

Query: 401 CIYSRRRSSTSKISVELGGMTPGWPC*P*A*SGEQVNLARSPTDIFATPSSQPRITSDFP 222
           C   R+  S S   +E G   P  P           + + +PT + ++P S+ +   D P
Sbjct: 568 CPRFRKLDSPSDSGIESGTEKPDKPA--------SSSASSAPTSVCSSPRSEDKEVEDMP 619

Query: 221 IL 216
           +L
Sbjct: 620 VL 621


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 133 TVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
           T    +  T+ NG   +  R+  KPF  +I
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKI 490


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 133 TVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 222
           T    +  T+ NG   +  R+  KPF  +I
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKI 490


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 21  ESEDLYLEKIEKYIVNNGCY 80
           + ED+    I+KY+ N  C+
Sbjct: 59  QEEDISEGNIKKYLTNYSCF 78


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 106 ESTYPKSGQTVVVHYTG 156
           + TYPK    +V  Y G
Sbjct: 99  QRTYPKEWSKIVQQYAG 115


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = +3

Query: 333 PWSHTSQLYTYFRCRTSTSRINTIC 407
           PW      +    C T T R+  +C
Sbjct: 135 PWRTCGNPWNTRYCLTPTERLEALC 159


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = +3

Query: 333 PWSHTSQLYTYFRCRTSTSRINTIC 407
           PW      +    C T T R+  +C
Sbjct: 188 PWRTCGNPWNTRYCLTPTERLEALC 212


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 106 ESTYPKSGQTVVVHYTG 156
           + TYPK    +V  Y G
Sbjct: 99  QRTYPKEWSKIVQQYAG 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,492
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)