Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8o14
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-P...    29   3.6  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   3.6  
AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembran...    29   3.6  
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro...    29   6.2  
AE014296-1594|AAF50313.2|  795|Drosophila melanogaster CG4684-PA...    29   6.2  
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ...    29   6.2  
BT021206-1|AAX33354.1|  252|Drosophila melanogaster SD28167p pro...    28   8.2  
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro...    28   8.2  

>AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-PB,
           isoform B protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 527 HDEAVSDSLAVAHQLAQFLHRVRNRRLGVHQHRFGEVHPFP 405
           +  +V+  L  A   A+   RV +RRL  HQH+   +H  P
Sbjct: 449 YPSSVASGLMAATMRARTQPRVLDRRLAPHQHQHHRIHAAP 489


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -1

Query: 101  GDRYCEQRNERCESHCD-TVCGWWNYAIRGRR 9
            GDR C+    RC   CD T CG  N  +R  +
Sbjct: 2344 GDRACDAETNRCIKPCDLTSCGKGNCQVRDHK 2375


>AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembrane
           protein Pxb protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 527 HDEAVSDSLAVAHQLAQFLHRVRNRRLGVHQHRFGEVHPFP 405
           +  +V+  L  A   A+   RV +RRL  HQH+   +H  P
Sbjct: 449 YPSSVASGLMAATMRARTQPRVLDRRLAPHQHQHHRIHAAP 489


>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p
           protein.
          Length = 1674

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 244 TS*FRPYRGVDGPRSTLGFGRTLSRKCKSSTDITNTLPSSRGRSHGPAL 390
           TS FR      G R   G  R   + C++    T TLPSS  R++GP +
Sbjct: 67  TSGFRSIETNGGGRKLFGGYRITPKHCRA----TKTLPSSDPRANGPTI 111


>AE014296-1594|AAF50313.2|  795|Drosophila melanogaster CG4684-PA
           protein.
          Length = 795

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 23/77 (29%), Positives = 28/77 (36%)
 Frame = +2

Query: 266 EESTAPAQLLDLDERYRENANHRRTLQILCRVREDAVTARRCSGASSGMDGPHRSGADGP 445
           EE+ A AQ     E+           +    VR  A  A   + ASS M      G D P
Sbjct: 459 EETQAAAQTKPKQEQQLSRDRTFSDSEDEPEVRPSAAAASSAAAASSSMMASSAGGWDDP 518

Query: 446 QVVCYELDEETGRADEP 496
             V +   EE    DEP
Sbjct: 519 TEVNWGAGEEEDDKDEP 535


>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
           protein.
          Length = 1629

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 244 TS*FRPYRGVDGPRSTLGFGRTLSRKCKSSTDITNTLPSSRGRSHGPAL 390
           TS FR      G R   G  R   + C++    T TLPSS  R++GP +
Sbjct: 67  TSGFRSIETNGGGRKLFGGYRITPKHCRA----TKTLPSSDPRANGPTI 111


>BT021206-1|AAX33354.1|  252|Drosophila melanogaster SD28167p
           protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 377 TARRCSGASSGMDGPHRSGADG---PQVVCYELDEETGRADEPRR 502
           TA    GA+ G  G    GADG    +VV  E +E+    DE RR
Sbjct: 105 TAAAGGGAAGGAAGGAAGGADGSAAEEVVSEEEEEDEDEEDEERR 149


>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p protein.
          Length = 2112

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 247  SSSATKAFVSSTSPPKSDCLHIGSDTFLHNSSSKAYSFCRKSST 116
            S+SA+ +  S+ S   S  LH G  T   +SSS    F   SS+
Sbjct: 1484 SASASASASSTASTSSSSTLHSGGKTSASSSSSSTTKFSSSSSS 1527


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,750,891
Number of Sequences: 53049
Number of extensions: 606626
Number of successful extensions: 2184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2184
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)