Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8o14
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    28   4.3  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    24   5.0  
Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U39999-9|AAY44013.1|  122|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical ...    27   10.0 
AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...    27   10.0 
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...    27   10.0 

>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 101 GDRYCEQRNERCESHCDTVCGWWN 30
           G  +C +R +    +C   CGW N
Sbjct: 535 GQNFCTRRRQWMAENCQATCGWCN 558


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 23.8 bits (49), Expect(2) = 5.0
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +2

Query: 389 CSGASSGMDGPHRSGADGPQVVCYELDEETGRADEPRRGCHLPPRHATGGRHG 547
           CSG+  G  G    G  G +          GR      G H   RH   GRHG
Sbjct: 294 CSGSPRGRHGHGGHGGHGSRS-----GSPGGRHGHGGSGHHRGGRHGGHGRHG 341



 Score = 22.6 bits (46), Expect(2) = 5.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 521 RHATGGRHGRVH 556
           RH  GGRHG  H
Sbjct: 350 RHGHGGRHGPPH 361


>Z70208-6|CAA94138.1|  183|Caenorhabditis elegans Hypothetical
           protein F54B11.6 protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +3

Query: 300 WTNAIEKMQIIDGHYKYFAEFARTQSRPGAVPAPVREWMDLTEA 431
           W  A   ++   GH++   +F R +   G  P PV+   + T++
Sbjct: 138 WNTAYCSVECQQGHWQIHRKFCRRKKSNGGAPGPVQPIAEPTQS 181


>U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical
           protein F20D6.5 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 190 LHIGSDTF--LHNSSSKAYSFCRKSSTEH 110
           L IG DTF  LHN+   AY+F +K S ++
Sbjct: 62  LFIGDDTFCKLHNTEVDAYTFLQKFSDKN 90


>U39999-9|AAY44013.1|  122|Caenorhabditis elegans Hypothetical
           protein F41G3.21 protein.
          Length = 122

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 250 NSSSATKAFVSSTSPPKSDCLHIGSDTFLHNSSSKAYSFCRKS 122
           NSSS+T   VSST+   S C+ + +     +  ++  S+C  S
Sbjct: 60  NSSSSTATSVSSTTSSSSTCVDLTNPRTGTSDCTRLASYCTNS 102


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 383 RRCSGASSGMDGPHRSGADGPQVVCYELDEE 475
           ++ SGA+ GMDG  R+G+   ++VC E  ++
Sbjct: 54  QQLSGAADGMDGSSRAGSQ--EIVCDEFTKK 82


>AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical
           protein T08B2.7c protein.
          Length = 697

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 384 GAVPAPVREWMDLTEAVLMDPKSSVTNSMKKLGELMSHGEAVTYRLVMLQEGGTD 548
           G  PAP++  +D+     +DPK       K  GEL    ++    L+ L +G TD
Sbjct: 315 GNYPAPLKI-LDVVRTAYVDPKKGFEAEAKAFGELSQTFQSKA--LIGLFDGSTD 366


>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 384 GAVPAPVREWMDLTEAVLMDPKSSVTNSMKKLGELMSHGEAVTYRLVMLQEGGTD 548
           G  PAP++  +D+     +DPK       K  GEL    ++    L+ L +G TD
Sbjct: 289 GNYPAPLKI-LDVVRTAYVDPKKGFEAEAKAFGELSQTFQSKA--LIGLFDGSTD 340


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 384 GAVPAPVREWMDLTEAVLMDPKSSVTNSMKKLGELMSHGEAVTYRLVMLQEGGTD 548
           G  PAP++  +D+     +DPK       K  GEL    ++    L+ L +G TD
Sbjct: 315 GNYPAPLKI-LDVVRTAYVDPKKGFEAEAKAFGELSQTFQSKA--LIGLFDGSTD 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,042,434
Number of Sequences: 27780
Number of extensions: 283311
Number of successful extensions: 939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)