Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8o13
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 175 2e-44
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 53 3e-07
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10) 47 1e-05
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 34 0.14
SB_14881| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 33 0.24
SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36) 31 0.73
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 31 1.3
SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 30 2.2
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 30 2.2
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_33329| Best HMM Match : Mak16 (HMM E-Value=0.15) 29 2.9
SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79) 29 3.9
SB_50105| Best HMM Match : fn3 (HMM E-Value=1.5e-28) 29 3.9
SB_31067| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_14022| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 29 5.1
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 29 5.1
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 5.1
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10) 29 5.1
SB_19059| Best HMM Match : Arm (HMM E-Value=0.044) 29 5.1
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 5.1
SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_48343| Best HMM Match : CBF (HMM E-Value=1.3) 28 9.0
SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_39476| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7) 28 9.0
SB_54157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 175 bits (427), Expect = 2e-44
Identities = 80/136 (58%), Positives = 101/136 (74%)
Frame = +3
Query: 300 EEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLV 479
E+D + SDDEEQED DYCKGGYHPV++GDLF NRY V RKLGWGHFSTVWL WD+
Sbjct: 21 EDDYEVDENSDDEEQEDPNDYCKGGYHPVQLGDLFNNRYSVIRKLGWGHFSTVWLAWDVS 80
Query: 480 DKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHV 659
+ ++VALK+VKSA H+TETA+DE+K+LR V +DP VQL +DFKI G+NG+ +
Sbjct: 81 ENKYVALKIVKSASHYTETAIDEMKLLRTVHTADPKHHGHKHVVQLTDDFKIVGINGSRI 140
Query: 660 CMVFEVLGHHLLKLIL 707
+ FE G +LL + L
Sbjct: 141 -LSFE--GPYLLYIFL 153
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3
Query: 372 GYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLV-DKRFVALKVVKSAPHFTETALDE 548
GY+ V+IG+L RY+V G G FS V D + V +K++++ +T L E
Sbjct: 649 GYYRVRIGELLDKRYNVYGFSGSGVFSNVVRARDQARGSQEVVVKIIRNNEMMHKTGLKE 708
Query: 549 IKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFEVLGHHLLKLILR 710
++ L+ + D+DP D + ++L F + H+C+VFE L H L+ +LR
Sbjct: 709 LEFLKKLNDADPDD--KYHCLRLYRHF----FHKNHLCLVFESL-HMNLREVLR 755
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/108 (27%), Positives = 49/108 (45%)
Frame = +3
Query: 408 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPT 587
+RY V LG G F V CW VA+K++K P + EI IL +
Sbjct: 96 SRYEVLEFLGRGTFGQVVKCWKKGTNELVAIKILKDHPSYARQGQIEISILAKL---SAE 152
Query: 588 DPKRNKTVQLLNDFKITGVNGTHVCMVFEVLGHHLLKLILRSNYRGIP 731
+ + V+ + F+ + H C+VFE+L +L + +S + +P
Sbjct: 153 NSEAYNFVRAIECFQ----HKNHTCLVFEMLQQNLYDYLKQSKFNPLP 196
>SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10)
Length = 892
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 384 VKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILR 563
VK G+ + +RY + +G G F V +D +K +A+K++K+ F A E+K+L
Sbjct: 378 VKAGEKWFDRYEIESLIGKGSFGQVCKAYDHQEKEHIAVKIIKNKKPFLNQAQIEVKLLE 437
Query: 564 AVRDSDP 584
+ +DP
Sbjct: 438 LMNKNDP 444
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 405 LNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALK---VVKSAPHFTETALDEIKIL 560
+ Y R +G G + TV+LC LVD V +K V + ++AL+E+K+L
Sbjct: 1 MQNYEKVRIVGRGAYGTVYLCRRLVDNFLVIIKQIPVEEMTKEERQSALNEVKVL 55
>SB_14881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 393 GDLFLNRYHVTRKLGWGHFSTVWLCWDL 476
G ++ NRY V R+LG G F TV+L DL
Sbjct: 19 GRVYANRYRVVRRLGSGSFGTVFLVEDL 46
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 405 LNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTE---TALDEIKILRAVR 572
+NRY +G G F + WL KR ALK + + +E AL+E+KIL ++
Sbjct: 1 MNRYQKIDIIGKGTFGSAWLVESRQSKRLYALKELNATAMPSEDRHLALNEVKILSTLK 59
>SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADY 362
E + S EEDE+E+ DD+ +DS+DY
Sbjct: 344 EDCQNKSGNNDEEDEEEESDDDDDNDDDSSDY 375
>SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36)
Length = 436
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 408 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV 506
N+Y + LG G FS V+ +DLV+ R+VA K+
Sbjct: 166 NQYLLLSLLGKGGFSEVYKGYDLVNHRYVACKI 198
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQED 350
E SS E +DEDE + DDEE+E+
Sbjct: 157 ESAEGSSEEEEMDDEDEDHDDDDEEEEE 184
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 359
E T E IE E+ SDDEE+++SAD
Sbjct: 460 EKTSEKDEEDIESTISEKKDSDDEEEQESAD 490
>SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 294 TIEEDEDEQYTSDDEEQEDSADY 362
T E+D+DE+ DDE+ ED DY
Sbjct: 18 TREDDDDEEEEDDDEDFEDEDDY 40
>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 270 PTHSSSNETIEEDEDEQYTSDDEE 341
PT+ S +E E +DE+Y S DEE
Sbjct: 2201 PTYDSGDEQEESSDDEEYESADEE 2224
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 359
E +SS+E EED DE DD++++D +
Sbjct: 189 EAEEASSDEDEEEDSDEDDDEDDDDEDDEEE 219
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 414 YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV-KSAPHFTETAL-DEIKILRAVR 572
Y+ +KLG G+F+ V C D + ++ A+K++ K E + DEI I+R R
Sbjct: 447 YNFGQKLGDGNFAIVRQCKDKITQKEFAIKIIDKRKIRGKEKMIDDEIAIMRRCR 501
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 201 REEEHGAIXXXXXXXXXXXXXXEPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 359
REEE + E E EE+E+E+ ++EE+ED D
Sbjct: 128 REEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDD 180
>SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQY-TSDDEEQEDSADYCKGGYHPVKI 392
EP +S T +ED+D+Q S DEE +++D + Y PV +
Sbjct: 248 EPLKASEVFTDDEDDDDQESKSSDEESYEASDEEQAEYAPVPV 290
>SB_33329| Best HMM Match : Mak16 (HMM E-Value=0.15)
Length = 265
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 300 EEDEDEQYTSDDEEQEDSADYCKGG 374
++DE+E+ DDEE+ED + +GG
Sbjct: 113 DDDEEEEEDDDDEEEEDDDEDGEGG 137
>SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79)
Length = 364
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 276 HSSSNETIEEDEDEQYTSDDEEQEDSADY 362
+ +E E D+D+ DD++ +DS+DY
Sbjct: 326 NDEEDEEEESDDDDDDDDDDDDDDDSSDY 354
>SB_50105| Best HMM Match : fn3 (HMM E-Value=1.5e-28)
Length = 721
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 288 NETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHV 422
N+ ++D+D+ +DD++ +D D GG P+ +F+ Y +
Sbjct: 498 NDDDDDDDDDDADNDDDDDDDDYD-DDGGLLPLDTDTIFVTWYSI 541
>SB_31067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 29.1 bits (62), Expect = 3.9
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +3
Query: 273 THSSSNETIEEDEDEQYTSDDEEQEDSAD 359
T++++N+ + +D+D+ DD++ +D D
Sbjct: 7 TNNNNNDNVNDDDDDDDDDDDDDDDDDDD 35
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 28.7 bits (61), Expect = 5.1
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 276 HSSSNETIEEDEDEQYTSDDEEQEDSAD 359
+ N+ +D+D++Y DDE++E+ +
Sbjct: 139 NGEDNDDSNDDDDDEYLDDDEDEEEEEE 166
>SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 309 EDEQYTS--DDEEQEDSADYCKGGYHPVKIG 395
+D++Y S DD E ED ++ KG Y+ + G
Sbjct: 49 DDDEYRSIDDDGEDEDGSNKAKGAYYQIPYG 79
>SB_14022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +3
Query: 405 LNRYHVTRKLG-WGHFSTVWLCWDLVDKRFVALKVVKSA----PHFTETALDEIKIL--- 560
+ R+++T K W HF+++ +R+V L + + A P +T DE +
Sbjct: 399 VERFNMTLKTKMWRHFTSLHFTHRNT-RRYVELHIAQDATVFRPKYTLPRADEYHMFLSS 457
Query: 561 RAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFEVLGHHLLKLILRS 713
A++ + P + N +L+D ++ +G + C V V+ H + ILR+
Sbjct: 458 NAIKGALPENTASN--FGILHDHRLDLSDGPYQCAVTNVVVHTRARDILRT 506
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 345 PAPRRRWCIAHLRLPQLFRWKNYALVLDD 259
PAP W + +++LPQ ++ Y++ DD
Sbjct: 769 PAPTVTWYLGNVKLPQNAKYPGYSVTRDD 797
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 435 GWGHF-STVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTDPKRNKTV 611
GW + VW W + VAL V S H +T E +R ++D +D + V
Sbjct: 748 GWDALPAAVWKYWKEISAALVALGVSPSDIHDLKTRPGETAYVRLLKDWRGSDVDILQEV 807
Query: 612 QLLNDFKITGVNGTHVCMVFEVLGHHLLK 698
+ + V G HV F+ +G ++ K
Sbjct: 808 SKVQS-SVQDV-GQHVAKGFKDVGQNVAK 834
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 300 EEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDL 401
++DE+E+ +DD++ +D D Y+ GDL
Sbjct: 223 DDDEEEEDDADDDDDDDDDDDDNDDYNETNNGDL 256
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 359
E E + EDEDE+ DEE+E+ D
Sbjct: 1803 EEMDDEEGEEMMEDEDEEADKGDEEEEEEGD 1833
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 303 EDEDEQYTSDDEEQEDSADYCKGGYHPVKIGD 398
+D+DEQ+ DE ++D D+ H K GD
Sbjct: 388 DDKDEQHDDKDEHRDDKDDHHDEDEHDEKKGD 419
>SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10)
Length = 1292
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 282 SSNETIEEDEDEQYTSD-----DEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGH 446
+S + EDE D DE+ S H ++ ++ +N +H + + H
Sbjct: 1041 TSKRCVPEDEPALGVEDRNRIRDEQMAASTHAPYADAHQARLNNVHVNGHHYSSWIAQTH 1100
Query: 447 FSTVWLCWDLVDKRFVALKVVKSAPHFTE 533
+ WL DLV+ VA + + F +
Sbjct: 1101 DTNQWLKIDLVNVTKVACVATQGSQEFQD 1129
>SB_19059| Best HMM Match : Arm (HMM E-Value=0.044)
Length = 603
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 468 WDLVDKRFVALKVVKSAPHFTETALDEIKILRAV-RDSDPTDPKRNKTV-QLLNDFKITG 641
W+++DKR + K SA +A +IL+ V + D DPK + +L+ K+TG
Sbjct: 221 WNVLDKRGMIGKSSGSA-----SARRRGEILKTVFKFLDINDPKLILRLGRLILSMKVTG 275
Query: 642 VNGTHVCMV 668
N T++CMV
Sbjct: 276 NNITNICMV 284
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 267 EPTHS--SSNETIEEDEDEQYTSDDEEQEDS--ADYCKGGYHPVKIGDLF-LNRYHVTRK 431
+P H S +E ++ +D+ +TSDD+ S AD G Y +I F +H+ RK
Sbjct: 545 DPDHIPLSKSEYLDGLKDDVFTSDDDSDVSSIIADSTSGEYDEPEISSPFHFTHFHLKRK 604
>SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 300 EEDEDEQYTSDDEEQEDSADYCKGGYH 380
++D+D+ +D++ +D D+ K YH
Sbjct: 120 DDDDDDDEEDEDDDDDDDDDFYKSQYH 146
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Frame = +3
Query: 276 HSSSNETIEEDEDEQYTSDDEEQEDS-----------ADYCKGGYHPVKIGDLFLNRYHV 422
H + TI++D +Q S+ E +DS AD+ KG Y V+ G NR V
Sbjct: 248 HGQFDSTIDQDLVKQILSESSESKDSRKSVDLRRSETADWIKGSYRTVESGSYSGNRMSV 307
Query: 423 TRKL 434
L
Sbjct: 308 HEDL 311
>SB_48343| Best HMM Match : CBF (HMM E-Value=1.3)
Length = 669
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 359
E H + +++D+DE DD+E +D D
Sbjct: 160 EERHHHRHSNVDDDDDECDDDDDDEDDDDDD 190
>SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 315 EQYTSDDEEQEDSADYCKGGYHPVKIGD 398
+ Y DD+ +D Y GGY IGD
Sbjct: 54 DDYDDDDDNDDDDDGYDDGGYDDDDIGD 81
>SB_39476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 288 NETIEEDEDEQYTSDDEEQEDSADYCKGGYH 380
N +ED D + T+D E+ EDS G H
Sbjct: 272 NNLDDEDSDAEETADQEDSEDSLSRLMKGKH 302
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +3
Query: 270 PTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRY 416
P +++N+ +++ED+ T DD++ +D+ D P I ++ ++ Y
Sbjct: 464 PRETNNNKAAKDNEDDDVT-DDDDSDDANDIGVQPTVPYNISNMAIHAY 511
>SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7)
Length = 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 285 SNETIEEDEDEQYTSDDEEQEDSADY 362
S E+ ++DE+E+ ++EE+ED Y
Sbjct: 9 SYESDDDDEEEEEEEEEEEEEDDVTY 34
>SB_54157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 279 SSSNETIEEDEDEQYTSDDEEQEDSAD 359
SSS + +D+D+ Y D+++ +D D
Sbjct: 75 SSSGMLMNDDDDDDYNDDEDDNDDDDD 101
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 267 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYH 380
+PT S + + + D D +Y ++E++ D + K +H
Sbjct: 424 QPTTSPATKAPKHDSDAKYNEEEEDEWDPFGFFKNFWH 461
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +3
Query: 459 WLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKI 635
WLC DL+ R V L + PHF E L + K RD + V+LLN F+I
Sbjct: 835 WLC-DLM-ARIVTLPIAN--PHFKEGILSKDKFEFIFRDETFPYEYYTQFVRLLNRFQI 889
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,938,726
Number of Sequences: 59808
Number of extensions: 422734
Number of successful extensions: 4596
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3678
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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