Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8o09
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.26 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.26 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 17/99 (17%), Positives = 41/99 (41%)
 Frame = +1

Query: 259 KRPLTPFFKFMSQMRPALLAKNPGISSKEAIAWTSKHWQQLDMETKTQMAKEYQKDLEDY 438
           K+PL  F  +M +MR  ++A+     S        + W  L  E + +  +  +++ + +
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLH 539

Query: 439 NKIKAMYETSLTEEQKADIKRVKEEMAQAKEKRKLKAEY 555
            ++   + +     +    KR ++        +K +A Y
Sbjct: 540 MQLYPDWSSRANATRGKKRKRKQDPADGGNSMKKCRARY 578



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 505 KEEMAQAKEKRKLKAEYKELGRPKKPMSSYFIYMQSRKDNIXGK-TLK 645
           K  +  +K  +      K+    KKP++++ +YM+  +  +  + TLK
Sbjct: 457 KNNLGDSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 504



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 389 RQKPKWRKNIRKIWRITIKLKQCMRH 466
           R++  WR+N     R+  + ++C  H
Sbjct: 593 REQLTWRRNFHGPHRLAARSRRCCYH 618



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 412 LSP-FGFLSPYQVVANVSTSML 350
           LSP  GF SPY     +STS L
Sbjct: 196 LSPGAGFRSPYPSALPISTSSL 217


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 17/99 (17%), Positives = 41/99 (41%)
 Frame = +1

Query: 259 KRPLTPFFKFMSQMRPALLAKNPGISSKEAIAWTSKHWQQLDMETKTQMAKEYQKDLEDY 438
           K+PL  F  +M +MR  ++A+     S        + W  L  E + +  +  +++ + +
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLH 431

Query: 439 NKIKAMYETSLTEEQKADIKRVKEEMAQAKEKRKLKAEY 555
            ++   + +     +    KR ++        +K +A Y
Sbjct: 432 MQLYPDWSSRANATRGKKRKRKQDPADGGNSMKKCRARY 470



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 505 KEEMAQAKEKRKLKAEYKELGRPKKPMSSYFIYMQSRKDNIXGK-TLK 645
           K  +  +K  +      K+    KKP++++ +YM+  +  +  + TLK
Sbjct: 349 KNNLGDSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 396



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 389 RQKPKWRKNIRKIWRITIKLKQCMRH 466
           R++  WR+N     R+  + ++C  H
Sbjct: 485 REQLTWRRNFHGPHRLAARSRRCCYH 510



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 412 LSP-FGFLSPYQVVANVSTSML 350
           LSP  GF SPY     +STS L
Sbjct: 88  LSPGAGFRSPYPSALPISTSSL 109


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 226 IFLYSHMIVLALSNLLFRIEQSCNSLKNNY 137
           IFL    + + LS+L+F  EQ  +SL  N+
Sbjct: 25  IFLVMSAVTIILSSLIFNQEQ-WSSLNKNF 53


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 623 LSFLDCMYIKYEDIGFLGR-PSSLYSAFNFLFSLACAISSLTLFISAFCSSVN 468
           L+ LD ++  + ++  L +  +S+Y   NFLF L+     +T F   + S  N
Sbjct: 208 LALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYCYDSGFN 260


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 239  LCSADFFV*SHDCIGVIQ 186
            +C+AD F   H C   IQ
Sbjct: 1004 ICAADVFYICHVCYATIQ 1021


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 239 LCSADFFV*SHDCIGVIQ 186
           +C+AD F   H C   IQ
Sbjct: 285 ICAADVFYICHVCYATIQ 302


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 13  VSFIVSLPYFVFELNIFLFININDKL*LK*SMTTYTQLQRLSNYFLGNYKTVL 171
           +S ++   YF  +LN    +NIN  L +  +  T+  +  + N F G     L
Sbjct: 425 ISLVIGAIYFGQDLNQDGVMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFL 477


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 13  VSFIVSLPYFVFELNIFLFININDKL*LK*SMTTYTQLQRLSNYFLGNYKTVL 171
           +S ++   YF  +LN    +NIN  L +  +  T+  +  + N F G     L
Sbjct: 425 ISLVIGAIYFGQDLNQDGVMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFL 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,007
Number of Sequences: 336
Number of extensions: 3080
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)