Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8o07
(664 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 31 0.008
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 0.97
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 2.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.0
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.8
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 6.8
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 6.8
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.0
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 31.1 bits (67), Expect = 0.008
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 105 RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 233
R I L +D + ++ TV S +K R C+C YKCGD
Sbjct: 92 RTITLTHCYDPDGVRLTAETVNSMDVKLREPAECKC--YKCGD 132
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.2 bits (50), Expect = 0.97
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 125 NK*HNEAVHSPFYWTVGGISHTYFFYMG 42
NK + A HSP + V + HT F MG
Sbjct: 61 NKNVSRADHSPVFGKVEPVPHTSSFNMG 88
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 516 SACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNP 406
S + + + +PG P RV T+ + S +VY P
Sbjct: 983 SETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 447 CLLDILDTAGQEEYSAMRDQYMRTGEGF 530
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 447 CLLDILDTAGQEEYSAMRDQYMRTGEGF 530
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 447 CLLDILDTAGQEEYSAMRDQYMRTGEGF 530
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 447 CLLDILDTAGQEEYSAMRDQYMRTGEGF 530
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 446 VFTRHPGHGWP 478
V++RHP WP
Sbjct: 156 VYSRHPYESWP 166
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +3
Query: 87 VKG*VNRLIVLFIAFDSNNTLISRFTVTSS 176
+ G V +V+FI FD ++ + + +T++
Sbjct: 370 IVGAVTTYLVIFIQFDQSSNSRNNYVLTNN 399
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 288 IYKIFFHTMSRH*KTTPQNHHTCITHI 208
IY IFF +H K C+T++
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYV 203
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 642 CPQVPWAPLPR 610
CPQV W+ P+
Sbjct: 173 CPQVQWSATPQ 183
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 9.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 531 RILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNPLS 400
R LP S C S ++L CP S R+ L+ G LS
Sbjct: 77 RDLPNSRCNSRESSDSLVQPRCPSGESMLS-ERAALLRGVPTLS 119
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,386
Number of Sequences: 336
Number of extensions: 3693
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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