Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8o07
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 173 3e-44
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 97 2e-21
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 67 2e-12
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 66 4e-12
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 64 1e-11
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 64 1e-11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 64 2e-11
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 63 4e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 61 1e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 61 2e-10
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 60 3e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 59 5e-10
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 56 3e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 54 2e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 54 2e-08
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 51 1e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 48 1e-06
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.45
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 28 1.4
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 1.8
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 27 3.2
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 4.2
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 26 4.2
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 4.2
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 26 5.6
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 5.6
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 25 7.4
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 7.4
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 9.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 25 9.7
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 25 9.7
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.7
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 25 9.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 9.7
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 173 bits (420), Expect = 3e-44
Identities = 82/125 (65%), Positives = 98/125 (78%)
Frame = +3
Query: 288 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 467
S + EYKL KSALTIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LD
Sbjct: 3 STYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLD 62
Query: 468 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 647
TAGQEEYSAMR+QYMRTGEGFLLV+ + S SF++I ++ +QI RVKD + P+VLV NK
Sbjct: 63 TAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANK 122
Query: 648 CDLQS 662
CDL++
Sbjct: 123 CDLEA 127
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 97.1 bits (231), Expect = 2e-21
Identities = 44/105 (41%), Positives = 70/105 (66%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
KS+LT+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++
Sbjct: 19 KSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGI 78
Query: 522 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 656
G++LV+++ S SFE + R++I E VP+V+VGNK DL
Sbjct: 79 HGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDL 123
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 67.3 bits (157), Expect = 2e-12
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 518
K+++ Q + F +Y TI D K+V++D + L + DTAGQE + ++ + R
Sbjct: 21 KTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRG 80
Query: 519 GEGFLLVFAVNSAKSFEDIGSYREQI---KRVKDAEEVPMVLVGNKCDLQ 659
+ +LV+ VN++KSFE + S+R++ + E P +L+GNK D++
Sbjct: 81 ADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVE 130
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 66.1 bits (154), Expect = 4e-12
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = +3
Query: 285 ISRKMTEY--KLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLL 455
+S K +Y KL KS L ++ ++ F + TI ++ + + +DG+ L
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 456 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVL 635
I DTAGQE + + Y R G LL++ V KSF+++ ++ +++ +E V +L
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKIL 119
Query: 636 VGNKCDLQ 659
+GNKCD +
Sbjct: 120 IGNKCDCE 127
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 64.5 bits (150), Expect = 1e-11
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 518
KS L ++ +N F E TI + + +V+D + I DTAGQE Y A+ Y R
Sbjct: 23 KSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRG 82
Query: 519 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 656
G L+V+ + SF+++G + ++++ D+ + ++LVGNK DL
Sbjct: 83 AVGALIVYDITKQSSFDNVGRWLKELREHADS-NIVIMLVGNKTDL 127
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 64.5 bits (150), Expect = 1e-11
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
K++L +F EY PT+ ++Y +DG++ L + DTAGQEEY +R
Sbjct: 21 KTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKA 80
Query: 522 EGFLLVFAVNSAKSFEDIGS-YREQIKRVKDAEEVPMVLVGNKCDLQS 662
L+ FA++S S E++ + + E+I + VP +LVG K DL+S
Sbjct: 81 HIILVGFAIDSPDSLENVSTKWIEEINTL--CPNVPFILVGMKADLRS 126
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 64.1 bits (149), Expect = 2e-11
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 518
K+ L Q + F EY TI D K VV+D + L + DTAGQE + ++ + R
Sbjct: 21 KTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRG 80
Query: 519 GEGFLLVFAVNSAKSFEDIGSYREQI--KRVKDAEEVPMVLVGNKCD 653
+ ++V+ VN++KSF+ + ++R++ + +D P ++VGN+ D
Sbjct: 81 ADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 62.9 bits (146), Expect = 4e-11
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 306 YKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 482
+KL KS L ++ + + + Y TI ++ + ++G+T L I DTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 483 EYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 656
+ + Y R G ++V+ V SF ++ + ++I R E V +LVGNK D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDM 125
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 61.3 bits (142), Expect = 1e-10
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
K+ L I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R
Sbjct: 16 KTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQT 75
Query: 522 EGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLVGNKCDLQ 659
+ FL+ F+V S SFE++ + ++ VP ++VG + DL+
Sbjct: 76 DVFLVCFSVTSPASFENVKEKWFPEVHH--HCPGVPCLIVGTQIDLR 120
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 60.9 bits (141), Expect = 2e-10
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
K++L + +F Y+PTI ++Y + +DG + L + DTAGQEEY +R
Sbjct: 26 KTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDT 85
Query: 522 EGFLLVFAVNSAKSFED-IGSYREQIKRVKDAEEVPMVLVGNKCDLQ 659
++ FAV+S S E+ I + ++ + V +VLV KCDL+
Sbjct: 86 HVIMICFAVDSRDSLENVITKWLPEVS--SNCPGVKLVLVALKCDLR 130
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 60.1 bits (139), Expect = 3e-10
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 515
KS+L ++ +++ F D + TI ++ Q + ID T + L+I DTAGQE Y ++ Y R
Sbjct: 27 KSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYR 86
Query: 516 TGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL 656
++V+ + A S E S+ ++++R + E + + L GNK DL
Sbjct: 87 NANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDL 132
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 59.3 bits (137), Expect = 5e-10
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +3
Query: 288 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDIL 464
S + ++KL K++L + + + F + Y TI D K + ++ T L +
Sbjct: 6 SFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 465 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGN 644
DTAGQE + ++ Y+R ++V+ + + SF + + E + R + ++V +VLVGN
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGN 124
Query: 645 KCDL 656
K DL
Sbjct: 125 KTDL 128
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 56.4 bits (130), Expect = 3e-09
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDTAGQEEYSAMRDQ 506
KS L + ++N + D+ T+ + +++ G + L I DTAGQE++ ++
Sbjct: 22 KSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARN 81
Query: 507 YMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQS 662
Y R G +LV+ V + SFE++ S+ I R + +VL G+K DLQ+
Sbjct: 82 YYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVVLAGSKSDLQN 132
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 54.0 bits (124), Expect = 2e-08
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDS 78
Query: 522 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS 662
L+ FAV+S S +++ + I V +P++LV K DL++
Sbjct: 79 HVILICFAVDSPDSLDNV--QEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDS 78
Query: 522 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS 662
L+ F+V++ +S +++ + I V +P++LVG K DL++
Sbjct: 79 HVVLICFSVDAPESLDNV--QEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +3
Query: 438 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAE 617
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++ + + RV E
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV--CE 112
Query: 618 EVPMVLVGNKCDLQ 659
+P+VL GNK D++
Sbjct: 113 NIPIVLCGNKVDVK 126
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 48.0 bits (109), Expect = 1e-06
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = +3
Query: 288 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL- 464
S+ T KL K+ L I F + Y PT+ ++Y + + ++++
Sbjct: 9 SKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELAL 68
Query: 465 -DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLV 638
DTAGQEEY +R LL F+++ S ++ + +++ P+VLV
Sbjct: 69 WDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHF--CPRTPIVLV 126
Query: 639 GNKCDLQ 659
G K DL+
Sbjct: 127 GLKADLR 133
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.45
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -1
Query: 634 STMGTSSASFTRLICSRYEPMSSKLLALLTANTSKNPSPVRM-YWSLIAEYSSWPAVSRM 458
+T SS+S T + SS LA + N++ + SP S A SS + S
Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTT 125
Query: 457 SSKHVSPSITTCLRYESSIVGS 392
SS S SIT+ SSI S
Sbjct: 126 SSSLASSSITSSSLASSSITSS 147
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 558 KSFEDIGSYREQIKRVKDAEEVPM 629
+S+ DIG QI+ +K+A E+P+
Sbjct: 188 ESYADIGGLESQIQEIKEAVELPL 211
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 1.8
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Frame = -1
Query: 652 SHLLPTSTMGTSSASF------TRLICSRYEPM-SSKLLALLTANTSKNPSPV---RMYW 503
SHL PTS +SS + T S P+ SS+ + T+N S+ PSP+ +
Sbjct: 237 SHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSNASRQPSPLVSSKSTD 296
Query: 502 SLIAEYS----SWPAVSRMSSKHVSPSITT 425
++I +S + +S +KH+ P+ +T
Sbjct: 297 NIIRSHSPVLLTPQTLSTSETKHIRPNNST 326
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +3
Query: 561 SFEDIGSYREQIKRVKDAEEVPMV 632
++ D+G +EQI+R+++ E+P++
Sbjct: 177 TYGDVGGCKEQIERLREVVELPLL 200
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -1
Query: 574 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 401
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 492 PNTLPGQPCPGCRVNTSHRRSRLVYGTN 409
P+T P QPC ++ T + R+VY N
Sbjct: 13 PSTKPSQPC---KIGTDFKGERIVYPAN 37
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 26.2 bits (55), Expect = 4.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 581 VSRADQASEGRGRGAHGTCGQQV 649
+ +A + G+G HG+CG+ V
Sbjct: 91 IHKASNGTNGKGGNRHGSCGKSV 113
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 426 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRV 605
V D + + LDT G + AMR + + +LV A + + + E IK +
Sbjct: 213 VPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTV----EAIKHI 268
Query: 606 KDAEEVPMVLVGNKCD 653
+ A +VP+V+ K D
Sbjct: 269 QSA-DVPVVVALTKSD 283
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 25.8 bits (54), Expect = 5.6
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +3
Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
+ +TIQ H E ++ KQ ++ ++I+DT G +++ ++ +R
Sbjct: 110 EKGITIQSAATHCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVL 169
Query: 522 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 653
+G +LV S + I + Q++R VP + NK D
Sbjct: 170 DGAVLVLCAVSGVQSQTI-TVDRQMRRY----NVPRISFVNKMD 208
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 583 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 452
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 444 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYREQIKRVKDAEE 620
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R++ EE
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKRFTEQVRVEE 333
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 646 LLPTSTMGTSSASFTRLICSRYE--PMSSKLLALLTANTSKNPSPVRMYWS 500
L+ T ++ T S T +I RY P S ++ A + TSK S + + WS
Sbjct: 14 LVDTESIYTKS---TNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWS 61
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 139 LESNAINNTMRRFTHPFTGQWVESPIHIFFIW 44
LE I+N HP T W SP H W
Sbjct: 692 LEIKGIDNNQVLLGHPITVCWTASPNHEINDW 723
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 387 RPRSDSVSAV*SMRIYQRLPHPQPPICTRSSCE 289
R RSDS+ A+ + PPI T S CE
Sbjct: 137 RLRSDSLKALRQFFSSKDFTETNPPIITSSDCE 169
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 32 SDL-IPYKKNMYGRFHPLSSKRVSE 103
SDL + Y+K+ YGRF +KR S+
Sbjct: 764 SDLPLDYRKSYYGRFSITDTKRFSK 788
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 25.0 bits (52), Expect = 9.7
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -1
Query: 652 SHLLPTS-TMGTSSASFTRLICSRYEPMSSKLLALLTANTSKN--PSPVRMYWSLIAEYS 482
SH L +S + FTRL + + S L AL+TAN + N P I E+S
Sbjct: 333 SHTLASSLAVYQFCLDFTRLNRTPEPYVRSSLQALITANNAVNLRDQPTSYMLECIREFS 392
Query: 481 SWPA 470
P+
Sbjct: 393 GLPS 396
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 519 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDA 614
G G LL F K + + Y+E+ K KDA
Sbjct: 557 GVGMLLSFFTKQEKLSQSVTEYKEKDKGFKDA 588
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 519 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDA 614
G G LL F K + + Y+E+ K KDA
Sbjct: 557 GVGMLLSFFTKQEKLSQSVTEYKEKDKGFKDA 588
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 599 ASEGRGRGAHGTCGQQVRPT 658
A E GR H TC Q+VRP+
Sbjct: 542 AVEEEGRIFHATCLQEVRPS 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,954,322
Number of Sequences: 5004
Number of extensions: 63034
Number of successful extensions: 220
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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