Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8o07
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    67   5e-13
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            62   2e-11
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    35   0.002
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    30   0.057
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   0.70 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.8  
AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like pepti...    23   6.5  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 66.9 bits (156), Expect = 5e-13
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +3

Query: 342 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 521
           K+ + I    + F  EY PT  D+Y   +V+DG    L + DTAGQE+Y  +R       
Sbjct: 19  KTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRPLSYPQT 78

Query: 522 EGFLLVFAVNSAKSFEDIGS-YREQIKRVKDAEEVPMVLVGNKCDLQ 659
           + FL+ ++V S  SFE++ S +  +IK      + P++LVG K DL+
Sbjct: 79  DVFLICYSVASPSSFENVTSKWYPEIKH--HCPDAPIILVGTKIDLR 123


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 62.1 bits (144), Expect = 2e-11
 Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +3

Query: 294 KMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDT 470
           K+ ++KL         KS+L ++ ++  F +  + TI  ++  Q + ID  T   +I DT
Sbjct: 21  KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDT 80

Query: 471 AGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKC 650
           AGQE Y ++   Y R  +  ++V+ + ++ SF    ++ ++++R + +  + + L GNK 
Sbjct: 81  AGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQR-QASPNIVIALAGNKA 139

Query: 651 DL 656
           DL
Sbjct: 140 DL 141


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 468 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 647
           +AGQE+Y  +R       + FL+ F+V S  SFE++   +   +     ++ P +LVG +
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV-KEKWVPEITHHCQKTPFLLVGTQ 59

Query: 648 CDLQ 659
            DL+
Sbjct: 60  IDLR 63


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 0.057
 Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -2

Query: 606 SLA*SARDTSQCLRNF*HC*RRIP-ARILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRS 430
           SL   A D     +N     R+IP +R  PR       SP +  G   P CR   + RRS
Sbjct: 228 SLGIKADDIENIYKNAHASIRKIPPSRRNPRRR-----SPRS--GGRWPSCRSPPARRRS 280

Query: 429 RLVYGTNPLSWDRIRPRS 376
           R    T P SW R RP S
Sbjct: 281 R---STRPTSWPRSRPTS 295


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 610 SFTRLICSRYEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYS 482
           SF R    R+  +   LL ++  +   NP   R+Y  L++ Y+
Sbjct: 6   SFRRSFADRWMTLGIVLLCMVIGSVWANPDAKRLYDDLLSNYN 48


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +3

Query: 363 LIQNHFVDEYDPTIEDSYRKQVVID-GET---CLLDILDTAGQEEYSAMRDQYMRTGEGF 530
           L++N  + +Y  T  D  R  V  D GE    C L +L    + EYSA  D Y    EGF
Sbjct: 472 LMENSVMKKYT-TKSDQARHYVQYDQGEDRWLCTL-LLKQKFRVEYSAASDAYTHAPEGF 529


>AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like peptide
           2 precursor protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 492 PNTLP-GQPCPGCRVNTSHRRS 430
           P+TLP G P PG  V+   RRS
Sbjct: 90  PDTLPPGFPYPGAGVHRRSRRS 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,389
Number of Sequences: 2352
Number of extensions: 15728
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)