BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8o06
(733 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 27 0.21
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 1.9
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 23 1.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 23 2.5
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 23 3.4
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 4.4
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 22 4.4
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 5.9
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 5.9
AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochr... 22 5.9
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 7.8
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 26.6 bits (56), Expect = 0.21
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 659 HSKHHPCRSKLTSWDEECSDNATNNQ*IFDGPKTILNSSSWIFR 528
H +H P K+T + + + N IF PKT + W+FR
Sbjct: 476 HLQHQPFTYKITV-NNQSNGNRKGTCRIFLAPKTDERGNPWLFR 518
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 51 AYNNIKIQILVIWNVNCS 104
A N +KI +++IW+ N S
Sbjct: 443 ANNGVKIPLVIIWSSNLS 460
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +2
Query: 185 CSTASVLLWQHCLFTMLFSM--SILHQFHLLPSYVCTNAGAGNYCVLYHFSSRIT**TSK 358
C + L L T+L + +I +HL + CT+ + ++ S +
Sbjct: 225 CKKINKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTVIQEVML 284
Query: 359 ATVLYKC 379
T+L+ C
Sbjct: 285 FTILWNC 291
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 146 YLTLFVLIVMFVLCTTIYIPNNKYLYFDI 60
Y++L L+ FV C IY+ Y+Y+ +
Sbjct: 137 YVSLLQLV--FVFCYFIYLFTVYYIYYSV 163
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -1
Query: 97 FTFQITSICILILLYALINIQI 32
+ I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -1
Query: 97 FTFQITSICILILLYALINIQI 32
+ I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -1
Query: 97 FTFQITSICILILLYALINIQI 32
+ I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -1
Query: 97 FTFQITSICILILLYALINIQI 32
+ I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.5
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = -2
Query: 252 KMDMLNNIVNKQCCHSNTLAVLQNKGPILHPFL-----VF-ISHFVCVDCDVCFMYYNLH 91
+ +M+NNI+ + S T+ L N IL + +F +C + + +LH
Sbjct: 115 RFEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNFVLLIGDLH 174
Query: 90 SK*QVSVF*YYYTH 49
+ + F +Y H
Sbjct: 175 TSIYIIFFDMFYQH 188
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 441 VGYLAVYRITFATCLFFLLMALIMIGVKS 527
VG + Y +TF FL++ L + G+ S
Sbjct: 280 VGNASGYTVTFLCLYLFLIITLTIYGLLS 308
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 173 QYCTHF*FLYLTLFVLIVMF 114
+YC YL++FV++V +
Sbjct: 320 KYCNFIILFYLSVFVILVYY 339
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 450 LAVYRITFATCLFFLLMAL 506
L+ R+ TCL FLL+AL
Sbjct: 59 LSPMRLIVQTCLDFLLLAL 77
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 623 SWDEECSDNATNNQ 582
SW+ CS N+T++Q
Sbjct: 178 SWNNPCSINSTSSQ 191
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 491 KEETCCKCNSINSQISNRF 435
KEE KC SQ+SN F
Sbjct: 263 KEELARKCGITVSQVSNWF 281
>AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 124
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 249 MDMLNNIVNKQCCHSNTLAVLQNKGPILHPFLVFISHFVCVDCDV 115
+D + NI +Q L ++ + L+P + I + VDC++
Sbjct: 30 IDNIENITMQQLQEMKYLEMVLKEAQRLYPSVPVIERRLEVDCNI 74
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 134 FVLIVMFVLCTTIYI 90
FV++ +F+LC + YI
Sbjct: 254 FVIVSVFILCWSPYI 268
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,857
Number of Sequences: 336
Number of extensions: 4130
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -