BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8o03
(236 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 3.1
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 20 4.2
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 20 4.2
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 20 4.2
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 20 4.2
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 19 7.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 19 7.3
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 19 7.3
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 19 7.3
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 19 7.3
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 19 7.3
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 19 9.6
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 19 9.6
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 19 9.6
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 19 9.6
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 19 9.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 19 9.6
AF260823-1|AAG02021.1| 138|Tribolium castaneum alpha-esterase l... 19 9.6
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.2 bits (40), Expect = 3.1
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 60 HDQHSRALLFRPPRK 104
+DQHS + ++PP +
Sbjct: 1007 NDQHSLVVYWKPPAR 1021
Score = 19.4 bits (38), Expect = 5.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 134 SGRKIVQDCPFAG 96
+G ++ CPFAG
Sbjct: 524 AGGTLIVHCPFAG 536
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 19.8 bits (39), Expect = 4.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 233 FFYGGPTTVTRTD 195
F+YGGP + D
Sbjct: 354 FYYGGPNSENNLD 366
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 19.8 bits (39), Expect = 4.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 233 FFYGGPTTVTRTD 195
F+YGGP + D
Sbjct: 356 FYYGGPNSENNLD 368
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 19.8 bits (39), Expect = 4.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 233 FFYGGPTTVTRTD 195
F+YGGP + D
Sbjct: 354 FYYGGPNSENNLD 366
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 19.8 bits (39), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 227 YGGPTTVTRTDLGG*EKT*PFRSRGCRRLDRSGRK 123
YG T+ R DLGG + T P + R D++ R+
Sbjct: 101 YGSVGTLGRGDLGGGD-TSPNSALQRARADKTYRR 134
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 19.0 bits (37), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 75 RALLFRPPRKRT 110
RALL RP K+T
Sbjct: 127 RALLTRPQAKKT 138
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 19.0 bits (37), Expect = 7.3
Identities = 5/12 (41%), Positives = 8/12 (66%)
Frame = -1
Query: 38 PNSIHTRVITPP 3
P S+H+ + PP
Sbjct: 1796 PPSVHSSTVVPP 1807
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 19.0 bits (37), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 134 SGRKIVQDCPFAGRT 90
S +K++ PF GRT
Sbjct: 258 SPKKLIVGIPFYGRT 272
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 19.0 bits (37), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 75 RALLFRPPRKRT 110
RALL RP K+T
Sbjct: 127 RALLTRPQAKKT 138
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory
receptor candidate 27 protein.
Length = 346
Score = 19.0 bits (37), Expect = 7.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 24 MNTIWLTALTKLHDQHSRALLFR 92
+NT +L ALT H ++ L++
Sbjct: 12 LNTFFLKALTVWHVENPTYRLYK 34
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 19.0 bits (37), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 75 RALLFRPPRKRT 110
RALL RP K+T
Sbjct: 127 RALLTRPQAKKT 138
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 77 IGSEDCLTLNVYTRD 91
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 77 IGSEDCLTLNVYTRD 91
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 77 IGSEDCLTLNVYTRD 91
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 77 IGSEDCLTLNVYTRD 91
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 76 IGSEDCLTLNVYTRD 90
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 18.6 bits (36), Expect = 9.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 104 TDSLVQSFDPSGQ 142
+DSLVQ PSG+
Sbjct: 90 SDSLVQPRCPSGE 102
>AF260823-1|AAG02021.1| 138|Tribolium castaneum alpha-esterase like
protein E4 protein.
Length = 138
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 135 LGSKDCTRLSVCGAD 91
+GS+DC L+V D
Sbjct: 49 IGSEDCLTLNVYTRD 63
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,688
Number of Sequences: 336
Number of extensions: 872
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3428128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -