Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8o03
         (236 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p pro...    28   1.5  
AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-P...    28   1.5  
BT024420-1|ABC86482.1|  435|Drosophila melanogaster IP03044p pro...    26   8.1  
AE014297-1624|AAF54897.1|  435|Drosophila melanogaster CG7996-PA...    26   8.1  

>BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p
           protein.
          Length = 1417

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 52  PSCTISIPELSCSVRPANGQSCTIFRPERSSLLQPLDLNGQVFSYP--PKSVRVTVVGPP 225
           PS  + +PE+S  V     QS T      ++   P D+N  +F+ P  P+ V V V  PP
Sbjct: 748 PSLEVVVPEVSQEVPSMEDQSSTSSETVSTTNSTPADVN--IFNMPSEPEEVVVKVQLPP 805


>AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-PA
            protein.
          Length = 1621

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 52   PSCTISIPELSCSVRPANGQSCTIFRPERSSLLQPLDLNGQVFSYP--PKSVRVTVVGPP 225
            PS  + +PE+S  V     QS T      ++   P D+N  +F+ P  P+ V V V  PP
Sbjct: 952  PSLEVVVPEVSQEVPSMEDQSSTSSETVSTTNSTPADVN--IFNMPSEPEEVVVKVQLPP 1009


>BT024420-1|ABC86482.1|  435|Drosophila melanogaster IP03044p
           protein.
          Length = 435

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 28  ILFG*QP*PSCTISIPELSCSVRPANGQSCTIFRPERSSLLQPLDLN 168
           + F  Q  P+C   +PEL      A G   T F   +S+ L+ +DL+
Sbjct: 293 VKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLD 339


>AE014297-1624|AAF54897.1|  435|Drosophila melanogaster CG7996-PA
           protein.
          Length = 435

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 28  ILFG*QP*PSCTISIPELSCSVRPANGQSCTIFRPERSSLLQPLDLN 168
           + F  Q  P+C   +PEL      A G   T F   +S+ L+ +DL+
Sbjct: 293 VKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLD 339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,158,205
Number of Sequences: 53049
Number of extensions: 168861
Number of successful extensions: 503
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)